DRSC/TRiP Functional Genomics Resources

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Protein Alignment Delta and dlk1

DIOPT Version :10

Sequence 1:NP_477264.1 Gene:Delta / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:XP_002936624.1 Gene:dlk1 / 100494606 XenbaseID:XB-GENE-988620 Length:382 Species:Xenopus tropicalis


Alignment Length:444 Identity:126/444 - (28%)
Similarity:180/444 - (40%) Gaps:134/444 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 SETGEIICLTGWQGDYCHIPKCAKGCEHGHCDKPNQCVCQLGWKGALCNECVLEPNCIHGTCNKP 274
            :||.||.|:.|     || |      .:|.|:...:|.|:.||||..|::|:..|.|:||:|.||
 Frog    29 TETKEIACMPG-----CH-P------VNGFCESQGECRCRTGWKGQFCDQCIPFPACMHGSCTKP 81

  Fly   275 WTCICNEGWGGLYCNQDLNYCTNHRPCKNGGTCFNTGEGLYTCKCAPGYSGDDCENEIYSCDADV 339
            |.|||.|||.|..|:.|::.|. .:||.:..||..||:|.|.|.|:.||:|.:|..:...|..:.
 Frog    82 WQCICEEGWVGSLCDIDVHPCA-AKPCSSNSTCIETGDGGYICLCSLGYTGKNCLLKKGPCSTNG 145

  Fly   340 NPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVLTCSDKPCHQGICRNVRPGLGSKGQGYQC 404
            :||||||.|.|.            ||::...                                .|
 Frog   146 SPCQNGGKCTDN------------NGFASYA--------------------------------SC 166

  Fly   405 ECPIGYSGPNCDLQLDNCSPNPCINGGSCQPSGKCICPAGFSGTRCETNIDDCLGHQCENGGTCI 469
            :||.|:.|..|::|:|                                 ||||..:.|.|||:|.
 Frog   167 QCPPGFIGNYCEIQID---------------------------------IDDCNPNPCRNGGSCT 198

  Fly   470 DMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNNDYQCTCRAGFTGKDCSVDIDECS 534
            |:.:.:.|.|..||.|..|:....||...||||||||..:...:||.|:..:||..||.      
 Frog   199 DIGSGFHCHCPLGFSGQFCNDLTPLCSSNPCANGGTCYQIGEKFQCFCQPKYTGTTCSF------ 257

  Fly   535 SGPCHNGGTCM-NRVNSFECVCANGFRGKQCDEESYDSVTFDAHQYGATTQARADGLTN-AQVVL 597
              |..|....: .|.||....       .:..:.....:|.      ..|....|.|.| :||:.
 Frog   258 --PHRNMSLHLYERRNSLPSY-------HKSPQHEVLKITV------KETIQNVDPLLNKSQVIC 307

  Fly   598 IAVFSVAMPLVAVIAACVVFCMK--------------RKRK-------RAQEKD 630
            ..|..:...|:.:|...:||..|              ||:|       |.:::|
 Frog   308 FIVLGLLTCLIVLITTGIVFFSKCETWFANAKYSRLLRKKKNIYMQRSRGEDRD 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DeltaNP_477264.1 MNNL 23..182 CDD:462222
DSL 164..226 CDD:128366 6/15 (40%)
EGF_CA 291..329 CDD:238011 15/37 (41%)
EGF_CA 337..372 CDD:238011 10/34 (29%)
EGF_CA 453..488 CDD:238011 15/34 (44%)
EGF_CA 492..526 CDD:238011 15/33 (45%)
EGF_CA 529..564 CDD:238011 5/35 (14%)
dlk1XP_002936624.1 EGF_CA 98..134 CDD:238011 15/36 (42%)
EGF_CA 143..178 CDD:238011 15/78 (19%)
EGF_CA 182..217 CDD:238011 16/67 (24%)
EGF 224..252 CDD:394967 12/27 (44%)
Blue background indicates that the domain is not in the aligned region.

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