DRSC/TRiP Functional Genomics Resources

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Protein Alignment Delta and jag1

DIOPT Version :10

Sequence 1:NP_477264.1 Gene:Delta / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:XP_002931784.1 Gene:jag1 / 100486874 XenbaseID:XB-GENE-485662 Length:1218 Species:Xenopus tropicalis


Alignment Length:587 Identity:245/587 - (41%)
Similarity:334/587 - (56%) Gaps:44/587 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLTAFICFTVIVQVHSSGSFELRLKYFSNDHGRDNEGRCCSGESDGATGKC-LGSCKTRFRVCLK 70
            |:.|.:|..:.|.: :||.|||.:....|.:|....|.||.|:.:....|| ...|.|.|:||||
 Frog    17 LIIALLCLRLKVSI-ASGQFELEILSMQNPNGELQSGNCCDGQRNPTDRKCSRDECDTYFKVCLK 80

  Fly    71 HYQATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSFSWPGTFSLIVEAW-- 133
            .||:.:.....|::|...||::|.||.||    ::......|.|..||||:||.:::|:||||  
 Frog    81 EYQSRVSAGGACSFGTGYTPVIGGNSFNL----KYSRNNERNRIVLPFSFAWPRSYTLVVEAWDY 141

  Fly   134 -HDTNNSGNARTNKLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRVTCDLNYYGSGCAKFC 197
             :|||:.|:      ||.:.|...::..|.:|:|.|..:..|..||..||.||.:|||.||.|||
 Frog   142 NNDTNDPGD------LIDKALHSGMINPSRQWQTLKQNAGMTHFEYQIRVICDEHYYGFGCNKFC 200

  Fly   198 RPRDDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGC--EHGHCDKPNQCVCQLGWKGALCNEC 260
            |||||.|||.||.:.|...||.||.|..|:...|.:||  :||.|..|.:|.||.||:|..|::|
 Frog   201 RPRDDFFGHYTCDQNGNKTCLEGWMGPECNKAICRQGCSSKHGTCKTPGECRCQYGWQGQYCDKC 265

  Fly   261 VLEPNCIHGTCNKPWTCICNEGWGGLYCNQDLNYCTNHRPCKNGGTCFNTGEGLYTCKCAPGYSG 325
            :..|.|:|||||:||.|:|...|||..|::|||||..::||.|||||.|||...|.|.|..||||
 Frog   266 IPHPGCVHGTCNEPWQCLCETNWGGQLCDKDLNYCGTYQPCLNGGTCSNTGPDKYQCSCPEGYSG 330

  Fly   326 DDCENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVLTCSDKPC-HQGICR 389
            .:||...::|.:|  ||.|||:|::   |..|::|.||.||:|..|...:..||..|| :.|.|:
 Frog   331 LNCEIAEHACLSD--PCHNGGSCLE---TSVGFECQCARGWTGPTCSINIDECSPNPCGYGGTCQ 390

  Fly   390 NVRPGLGSKGQGYQCECPIGYSGPNCDLQLDNCSPNPCINGGSCQ---PSGKCICPAGFSGTRCE 451
            ::       ..|::|.||..::|..|.:..:.|...||:|..||:   .|..|.|..|::|..|:
 Frog   391 DL-------VDGFKCICPSQWTGKTCQIDANECEAKPCVNANSCRNLIGSYYCNCLPGWTGQNCD 448

  Fly   452 TNIDDCLGHQCENGGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNNDYQCT 516
            .||:|||| ||:|||||.|:||.:||.|.||:.|..|...|:.|:..||.|||.|.:..|.:||.
 Frog   449 ININDCLG-QCQNGGTCRDLVNGFRCICPPGYAGERCEKDVNECVSNPCLNGGHCQDEINGFQCL 512

  Fly   517 CRAGFTGKDCSVDIDECSSGPCHNGGTCMNRVNSFECVCANGFRGKQCDE----------ESYDS 571
            |.|||:|..|.:|||.|...||.||..|.|....:.|.|:..:.||.|..          |..||
 Frog   513 CPAGFSGNLCQLDIDYCEPDPCQNGAQCFNLATDYFCNCSEDYEGKNCSHLKDHCRTTPCEVIDS 577

  Fly   572 VT 573
            .|
 Frog   578 CT 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DeltaNP_477264.1 MNNL 23..182 CDD:462222 58/162 (36%)
DSL 164..226 CDD:128366 34/61 (56%)
EGF_CA 291..329 CDD:238011 22/37 (59%)
EGF_CA 337..372 CDD:238011 15/34 (44%)
EGF_CA 453..488 CDD:238011 22/34 (65%)
EGF_CA 492..526 CDD:238011 16/33 (48%)
EGF_CA 529..564 CDD:238011 14/34 (41%)
jag1XP_002931784.1 MNNL 32..185 CDD:462222 58/162 (36%)
DSL 167..229 CDD:128366 34/61 (56%)
EGF_CA 296..334 CDD:238011 22/37 (59%)
EGF 340..370 CDD:394967 16/34 (47%)
EGF_CA 374..410 CDD:238011 11/42 (26%)
EGF_CA 412..447 CDD:238011 11/34 (32%)
EGF_CA 450..485 CDD:238011 22/35 (63%)
EGF_CA 487..523 CDD:238011 16/35 (46%)
EGF_CA 525..560 CDD:238011 14/34 (41%)
EGF_CA 629..665 CDD:238011
EGF_CA 667..702 CDD:238011
EGF 709..739 CDD:394967
EGF 748..778 CDD:394967
EGF_CA 782..817 CDD:238011
EGF_CA 820..856 CDD:238011
VWC_out 863..929 CDD:214565
Blue background indicates that the domain is not in the aligned region.

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