DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Delta and adgre2

DIOPT Version :10

Sequence 1:NP_477264.1 Gene:Delta / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:XP_002941921.2 Gene:adgre2 / 100485797 XenbaseID:XB-GENE-6046733 Length:803 Species:Xenopus tropicalis


Alignment Length:565 Identity:152/565 - (26%)
Similarity:214/565 - (37%) Gaps:180/565 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 EYDFRVTCDLNYYGSG--------CAK---------FCRPRDDSFGHSTCSETGEIICLTGWQGD 224
            |..:|..|...:..:|        ||:         .|   ::|.|...|.      |..|::|:
 Frog   233 EGSYRCRCQAGFRETGQACVDIDECAENPSLCSGLGVC---ENSLGSYVCG------CQPGFRGN 288

  Fly   225 --YCHIP-KCAK---GCE-HGHCDK---PNQCVCQLGWK--GALC---NEC-VLEPNCIHGTCNK 273
              ||... :||.   ||: :.||..   ...|.|..|:.  |..|   :|| |...:|.|...|:
 Frog   289 GTYCEDENECASGGHGCDSNAHCGNIIGSYFCQCYQGFNGDGHSCFDIDECSVNNGDCPHSCVNQ 353

  Fly   274 --PWTCICNEGWGGLYCNQDLNYCTNHRPCK--NG---GTCFNTGEGLYTCKCAPGY-------- 323
              .:.|.|..|:   ...:|...||:...|:  ||   ..|.|| :|.|.|.|..|:        
 Frog   354 AGSYRCQCRPGY---LLQEDAKNCTDIDECETANGECAQICENT-DGSYGCSCRKGFQLHVDLKQ 414

  Fly   324 --SGDDCENEIYSCDADVNPCQNGGTCIDEPH------TKT------------------------ 356
              ..|:|:.:...|....|..:.|..|:..||      ::|                        
 Frog   415 CIDIDECKIDNGGCAHTCNNTEGGFLCLCPPHQALAKDSRTCINITSCSTRNGGCDHVCSQKQEG 479

  Fly   357 GYKCHCANGW----SGKMCEEKVLTCSD---KPCHQGICRNVRPGL----GSKG----------- 399
            |::|.|..||    :|:.||: |..|:|   ..|.|. |.|: ||.    .:||           
 Frog   480 GFECSCRAGWLLSSNGRTCED-VDECADFTRGGCEQQ-CENL-PGTFHCSCTKGFTLRSDEPTKC 541

  Fly   400 --------QGY-------QCECPIGYSGPNCDLQLDNCSPNPCINGGSCQPSGKCICPAGFSGTR 449
                    |.|       .|:||.||.||.|..   .||| ||.:||:|.....|.||.|::|..
 Frog   542 QPVCNPPCQNYGVCVAPDTCDCPAGYPGPGCSA---TCSP-PCAHGGTCMRHNMCQCPTGWTGPG 602

  Fly   450 CETNI--------------DDC------LGHQ---------CENGGTCIDMVNQYRCQCVPGFHG 485
            |:..:              |.|      .|.|         |.|||.||| ||  :|.|..|:.|
 Frog   603 CQAAVCELPCANGGRCVAPDSCQCTFGYSGEQCLTPLCSPPCLNGGKCID-VN--KCVCPAGWLG 664

  Fly   486 THCSSKVDLCLIRPCANGGTCLNLNNDYQCTCRAGFTGKDCSVDIDECSSGPCHNGGTCMNRVNS 550
            ..|..:...| .:.|.|||.|:..|:   |.|.|||.|..|...:.|....||.:|.||   |..
 Frog   665 ARCQIEPVRC-EKECLNGGKCVGYNS---CRCPAGFLGPQCQTAVIEPCVPPCKHGATC---VQF 722

  Fly   551 FECVCANGFRGKQCDEESYDSVTFDAHQYGATTQARADGLTNAQV 595
            .:|.||.|..|.:|::.:...||...    :|.:|...|:..:.|
 Frog   723 NKCQCAEGTAGHRCEKLTCPIVTTKL----STARAIRQGVRESYV 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DeltaNP_477264.1 MNNL 23..182 CDD:462222 1/4 (25%)
DSL 164..226 CDD:128366 13/67 (19%)
EGF_CA 291..329 CDD:238011 15/52 (29%)
EGF_CA 337..372 CDD:238011 12/68 (18%)
EGF_CA 453..488 CDD:238011 17/63 (27%)
EGF_CA 492..526 CDD:238011 13/33 (39%)
EGF_CA 529..564 CDD:238011 12/34 (35%)
adgre2XP_002941921.2 EGF_CA 123..160 CDD:214542
EGF_CA 164..210 CDD:214542
EGF_CA 211..252 CDD:214542 4/18 (22%)
EGF_CA 253..293 CDD:214542 10/48 (21%)
EGF_3 298..333 CDD:463759 10/34 (29%)
FXa_inhibition 339..374 CDD:464251 9/37 (24%)
vWFA <374..413 CDD:469594 13/39 (33%)
FXa_inhibition 421..456 CDD:464251 7/34 (21%)
FXa_inhibition 462..498 CDD:464251 6/35 (17%)
vWFA <495..539 CDD:469594 14/46 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.