DRSC/TRiP Functional Genomics Resources

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Protein Alignment Delta and dlc

DIOPT Version :10

Sequence 1:NP_477264.1 Gene:Delta / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:NP_001096242.1 Gene:dlc / 100124798 XenbaseID:XB-GENE-968497 Length:642 Species:Xenopus tropicalis


Alignment Length:655 Identity:251/655 - (38%)
Similarity:338/655 - (51%) Gaps:109/655 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LTAFICFTVIVQVHSSGSFELRLKYFSNDHGRDNEGRCCSGESDGATGKCLGSCKTRFRVCLKHY 72
            |.|.:|..:   ||.:|.|||::..||........||.||               ..|||||||.
 Frog    10 LAATVCLPL---VHPAGVFELKIHSFSTPRPACIAGRPCS---------------IFFRVCLKHA 56

  Fly    73 QATIDTTSQCTYGDVITPILGENSVNLTDAQRFQNKGFTNPIQFPFSFSWPGTFSLIVEAW---- 133
            |..:.....||:|..::.||...|..::|         ::||:.||.|.|||.||||:|:|    
 Frog    57 QPVVSPDPPCTFGSAVSDILPYESKAVSD---------SSPIRVPFHFKWPGIFSLIIESWTTVS 112

  Fly   134 --HDTNNSGNARTNKLLIQRLLVQQVLEVSSEWKTNKSESQYTSLEYDFRVTCDLNYYGSGCAKF 196
              ..|.|..|      |:.||..::.|.|..:|..:....|.:.|.|.:.|:||.:|||..|:.:
 Frog   113 AEQSTENPDN------LLSRLATRRRLSVGEDWSQDIHLGQQSELRYSYHVSCDEHYYGDSCSDY 171

  Fly   197 CRPRDDSFGHSTCSETGEIICLTGWQGDYCHIPKCAKGC--EHGHCDKPNQCVCQLGWKGALCNE 259
            ||||||:|||.||.|.|..:||:||:|:||..|.|..||  .||.|:.|.:|.|::||:|.||:|
 Frog   172 CRPRDDNFGHYTCDEQGNRLCLSGWKGEYCAEPICLPGCSESHGFCEIPGECKCRMGWQGQLCDE 236

  Fly   260 CVLEPNCIHGTCNKPWTCICNEGWGGLYCNQDLNYCTNHRPCKNGGTCFNTGEGLYTCKCAPGYS 324
            ||..|.|.||:|::||.|||.||||||:||||||||||||||:||.:|.|||:|.|:|.|..|::
 Frog   237 CVRYPGCQHGSCSQPWECICQEGWGGLFCNQDLNYCTNHRPCRNGASCINTGQGSYSCNCRAGFT 301

  Fly   325 GDDCENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVLTCSDKPC-HQGIC 388
            |.:||.:|..|.:  |||:|||:|.|   .:..|:|.|..|:.||.|:...:||.|.|| :.|.|
 Frog   302 GTNCEIDINECAS--NPCKNGGSCND---LENDYECVCPRGFYGKNCDISAMTCEDGPCFNGGTC 361

  Fly   389 RNVRPGLGSKGQGYQCECPIGYSGPNCDLQLDNCSPNPCINGGSCQPSGK---CICPAGFSGTRC 450
            ..     .|.|.||.|.||:.|.|.||:.::|.|:.:||:|||.|...|:   |.|..||||.||
 Frog   362 IE-----KSSGVGYICRCPLNYHGSNCEKKIDRCTNSPCLNGGQCLDMGRNVLCKCRPGFSGPRC 421

  Fly   451 ETNIDDCLGHQCENGGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNNDYQC 515
            |.|||||..:.|.|||||:|.|                                      |.|.|
 Frog   422 ELNIDDCASNPCANGGTCVDAV--------------------------------------NSYTC 448

  Fly   516 TCRAGFTGKDCSVDIDECSSGPCHNGGTCMNRVNSFECVCANGFRGKQCDEESYDSVTFDAHQYG 580
            :|..|:.||||::.:|.|||.||.|||||....:...|.|..||.|..|:        |..|...
 Frog   449 SCTLGYGGKDCTLRVDACSSQPCSNGGTCFTHFSGHVCQCPTGFMGTSCE--------FRVHDPT 505

  Fly   581 ATTQARADGLTNAQVVLIAVFSVAMPLVAVIAACVVFCMKRKRKRA--QEKDDAEARKQNEQNAV 643
            ..:.......|...||.:.:      |...:..|.|:.:.|..:|.  .||...:...:.:.|.:
 Frog   506 PASHGADSSNTLTMVVCLGL------LTFFLLGCGVYLVMRGMRRGHFNEKGRVKNNLEPKNNLI 564

  Fly   644 ATMHH 648
            ....|
 Frog   565 EKEPH 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DeltaNP_477264.1 MNNL 23..182 CDD:462222 51/164 (31%)
DSL 164..226 CDD:128366 29/61 (48%)
EGF_CA 291..329 CDD:238011 23/37 (62%)
EGF_CA 337..372 CDD:238011 14/34 (41%)
EGF_CA 453..488 CDD:238011 13/34 (38%)
EGF_CA 492..526 CDD:238011 7/33 (21%)
EGF_CA 529..564 CDD:238011 16/34 (47%)
dlcNP_001096242.1 MNNL 22..157 CDD:462222 51/164 (31%)
DSL 139..201 CDD:128366 29/61 (48%)
EGF_CA 268..306 CDD:238011 23/37 (62%)
EGF_CA 308..343 CDD:238011 16/39 (41%)
EGF_CA 387..422 CDD:238011 16/34 (47%)
EGF_CA 424..460 CDD:238011 21/73 (29%)
EGF_CA 463..498 CDD:238011 16/34 (47%)

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