DRSC/TRiP Functional Genomics Resources

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Protein Alignment Delta and si:ch73-281k2.5

DIOPT Version :10

Sequence 1:NP_477264.1 Gene:Delta / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:XP_009302182.2 Gene:si:ch73-281k2.5 / 100002182 ZFINID:ZDB-GENE-141222-10 Length:256 Species:Danio rerio


Alignment Length:240 Identity:89/240 - (37%)
Similarity:121/240 - (50%) Gaps:21/240 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 CNQDLNYCTNHRPCKNGGTCFNTGEGLYTCKCAPGYSGDDCENEIYSCDADVNPCQNGGTCIDEP 352
            |..:::.|.||| |:||.||.: |...|||:|.|.::|..|.:::..|....|.|||||.|   .
Zfish    28 CEVNIDDCLNHR-CQNGATCMD-GVNTYTCQCPPKWTGQFCTDDVDECRLQPNACQNGGKC---S 87

  Fly   353 HTKTGYKCHCANGWSGKMCEEKVLTCSDKPCHQG-ICRNVRPGLGSKGQGYQCECPIGYSGPNCD 416
            :|:.||.|.|.|||||..|.|.:..|:..||..| .|.:       :...:.|.||.|.:|..|.
Zfish    88 NTRNGYNCECVNGWSGLDCSENIDDCAYTPCFAGSTCID-------RVASFFCSCPPGKTGLLCH 145

  Fly   417 LQLDNCSPNPCINGGSCQP---SGK--CICPAGFSGTRCETNIDDCL--GHQCENGGTCIDMVNQ 474
            |. |.|..|||..|..|..   :||  |.||:|:.|..||.:||:|:  .:.||:||.|.:....
Zfish   146 LD-DACISNPCKMGAECDTNPLNGKFYCNCPSGYKGRTCEEDIDECVIGPNPCEHGGLCKNTEGS 209

  Fly   475 YRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNNDYQCTCRA 519
            :.|.|..|:.|..|..|:..|...||.|...|.....:|.|.|.|
Zfish   210 FTCYCASGYTGPRCEHKIKDCDFNPCQNDARCFVEMGNYSCMCMA 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DeltaNP_477264.1 MNNL 23..182 CDD:462222
DSL 164..226 CDD:128366
EGF_CA 291..329 CDD:238011 16/37 (43%)
EGF_CA 337..372 CDD:238011 17/34 (50%)
EGF_CA 453..488 CDD:238011 12/36 (33%)
EGF_CA 492..526 CDD:238011 9/28 (32%)
EGF_CA 529..564 CDD:238011
si:ch73-281k2.5XP_009302182.2 None
Blue background indicates that the domain is not in the aligned region.

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