DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dl and sned1

DIOPT Version :9

Sequence 1:NP_001247193.1 Gene:Dl / 42313 FlyBaseID:FBgn0000463 Length:833 Species:Drosophila melanogaster
Sequence 2:XP_017212114.1 Gene:sned1 / 100001751 ZFINID:ZDB-GENE-100913-1 Length:1374 Species:Danio rerio


Alignment Length:866 Identity:220/866 - (25%)
Similarity:312/866 - (36%) Gaps:284/866 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 IDTTSQCTY--GDVITPILGENSVNLTDAQ------RFQNKGFTNPIQFPFSFSWPGTFSLIVEA 132
            |.|..|.|:  |..|||:.....|.:||.:      ::.|..:|..:.........|...:..:|
Zfish   150 IATWHQVTFFGGSSITPVNTFQVVLITDGELSFTIFQYHNITWTTGMHATSGGDLAGLGGIAAQA 214

  Fly   133 WHDTN------NSGNARTNKLLIQRLLVQQVLEVSS--------EW--KTNKSESQYTSLEYDFR 181
            ..:..      |...:||:          .::|:.:        .|  :.:.|..|.........
Zfish   215 GFNAGDGKRYFNIPGSRTD----------DIVEIETTTNVGYPGRWVFRIDDSHVQVGGCNDSAS 269

  Fly   182 VTCDLN--YYGSGCAKFCRPRDDSFGHSTCSETGEIICLTGWQGDYCHI--PKCAK-GCEH-GHC 240
            |..:|.  ..|..|...|...:.||   |||      ||.|:.|..|.|  .:|:. .|:: |.|
Zfish   270 VCANLRPCRNGGRCIDDCITGNPSF---TCS------CLAGFTGRRCQIEVDECSSYPCQNGGTC 325

  Fly   241 -DKPNQ--CVCQLGWKGALC----NECVLEP-----NCIHGTCNKPWTCICNEGWGGLYCNQDLN 293
             ||.|.  |:|.:|:.||.|    :||...|     .||.|..|  :||.|..|:.|..|..|:|
Zfish   326 VDKINHFICLCPVGFIGATCETDIDECQETPCLNGAQCIQGVGN--FTCKCQAGYTGFLCESDIN 388

  Fly   294 YCTNHRPCKNGGTCFN-----------------------------------------------TG 311
            .|.: .||.|||.|.:                                               |.
Zfish   389 ECMS-VPCLNGGVCEDLVNNYTCTCTANFTGSACETELVVADAANQTESCVGEICNKHQICEYTN 452

  Fly   312 EGLYTCKCAPGYSGDDCENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKV- 375
            .|.|:|.|.|||.||:||.|   |     ||||||.|:|...|     |.|..|::|..|:.:| 
Zfish   453 SGNYSCTCMPGYYGDNCEEE---C-----PCQNGGICVDVNGT-----CDCPTGFTGLYCQFEVT 504

  Fly   376 -LTCS-DKPCHQG------------ICRN------------VRP------------GLGSKGQG- 401
             ..|| ::||..|            .|:.            |:|            |...:..| 
Zfish   505 QTPCSNNRPCPDGGPCLEYGGTYLCTCQTGAEFDHKDFYPYVQPQSACDSSPCQNGGYCYERDGD 569

  Fly   402 YQCECPIGYSGPNCD-LQLDNCSPNPCINGGSCQ---PSGKCICPAGFSGTRCET-NIDDCLGHQ 461
            |.|||..||.|.:|: ::|..|:.:||.|||||:   .|..|:||..|:|..||. ..|.|....
Zfish   570 YICECKHGYRGKHCERVRLSICASSPCRNGGSCKEEADSYHCVCPYRFTGKHCEVGKPDPCASSP 634

  Fly   462 CENGGTCIDMVNQYRCQCVPGFHGTHCS------------------------------------- 489
            |.|||||...:.:|:|:|.|.|.|.||.                                     
Zfish   635 CRNGGTCFHYIGKYKCECSPSFMGRHCEINRGSNPALEGLDCGPPVKAKHAEVQYSSTTPGSMAL 699

  Fly   490 ------------------------------SKVDLCLIRPCANGGTCLNLNNDYQCTCRAGFTGK 524
                                          .:::.||.:||.|||||.:....|.|.|..||||:
Zfish   700 YLCHPGYTPLTRATQIICSSQGSWSQPPVCEEINECLSQPCMNGGTCRDRVASYLCECEEGFTGQ 764

  Fly   525 DCSVDIDECSSGPCHNGGTCMNRVNSFECVCANGFRGKQCDEESYDSVTFDAHQYGATTQARADG 589
            .|..|:|||.|.||.:|.||.::..|:.|.|..|:.|:.|:.|............|.....|.:.
Zfish   765 RCQTDMDECLSEPCKHGSTCEDQPGSYFCHCQEGYAGQDCEMEQDGCEPNPCLNGGICRGYRRNH 829

  Fly   590 LTNAQVVLIAVFSVAMPLVAVIAACVVFCMKRKRKRAQ--------------------------- 627
            |...:...|......:....|:..|....:.|..:|..                           
Zfish   830 LCVCKEGYIGDRCQTLENPCVLQPCGNRGVCRSDRRGNYSCACRVGHTGRDCERDLLPPSGLNVL 894

  Fly   628 --EKDDAEAR-KQNE--QNAVATMHHNGSGVGVALASASLG---GKTG----SNSGLTFDGGNPN 680
              |:::.|.| .|::  ||.::         |.|:|.|.:|   .||.    .:|.....|.||.
Zfish   895 RVEENEVELRWDQSDVTQNLIS---------GFAVAFAPVGRVPRKTDFLEKKHSTYVLQGLNPG 950

  Fly   681 IIKNTWDKSVNNICASAAAAA 701
            .:.|....|||:|..|..|.|
Zfish   951 QLYNISTYSVNSIDKSQPAFA 971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DlNP_001247193.1 MNNL 23..96 CDD:284966 8/21 (38%)
DSL 164..226 CDD:279722 17/65 (26%)
EGF_CA 291..329 CDD:238011 19/84 (23%)
EGF_CA 337..372 CDD:238011 13/34 (38%)
EGF_CA 453..488 CDD:238011 14/34 (41%)
EGF_CA 492..526 CDD:238011 16/33 (48%)
EGF_CA 529..564 CDD:238011 15/34 (44%)
sned1XP_017212114.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D197806at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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