DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5250 and SHBG

DIOPT Version :9

Sequence 1:NP_650793.1 Gene:CG5250 / 42308 FlyBaseID:FBgn0038691 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001031.2 Gene:SHBG / 6462 HGNCID:10839 Length:402 Species:Homo sapiens


Alignment Length:137 Identity:32/137 - (23%)
Similarity:51/137 - (37%) Gaps:38/137 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 LIKITQ-ALGFQAVTYDDALTLPE----YAPDELFD--YVVGLGS---EERFNRIWVSCQV-IEP 209
            |.|||: :..|:..|:|     ||    |......|  :::||..   |.:.:..|....| ..|
Human    63 LTKITKTSSSFEVRTWD-----PEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVGAGP 122

  Fly   210 RVDIQFDYHPVRFFDAEELFTSGNVFLNESSDD-------DGP-TYKEDPRLRRII--------S 258
            |:|      ..|:...|......:|.|....::       .|| |.|..|.:|..:        :
Human   123 RLD------DGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASN 181

  Fly   259 VRLSNIP 265
            :||..:|
Human   182 LRLPLVP 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5250NP_650793.1 Na_K-ATPase <143..281 CDD:298651 32/137 (23%)
SHBGNP_001031.2 Laminin_G_1 75..205 CDD:278483 27/125 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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