DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5250 and atp4b

DIOPT Version :10

Sequence 1:NP_650793.1 Gene:CG5250 / 42308 FlyBaseID:FBgn0038691 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_001005806.1 Gene:atp4b / 448282 XenbaseID:XB-GENE-944891 Length:295 Species:Xenopus tropicalis


Alignment Length:266 Identity:49/266 - (18%)
Similarity:97/266 - (36%) Gaps:72/266 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 TVCRFIKLLLYFIGFFFV-LGVFTTGL-ALVMIANHIYPDRPGCKKFPGLATAPGHHVGDQKQIM 106
            |..:::.:.||:..|:.: :|:|...: :|:...|...||.....|.||:...|..:..:..::.
 Frog    33 TFAKWVYISLYYAAFYVIMIGIFALSIYSLMKTMNPFVPDYQDELKSPGVTMRPDPYGDEVIELF 97

  Fly   107 WSPNN-------IKDVANIQRAIMRTVK-----------RYGLEGPKR-----------LMGCN- 141
            ::...       :..:.:......:||:           |.....||.           |..|: 
 Frog    98 YNKAENSTYLPLVTSLCDFLSVYNKTVQEKMNANCSDNTRMSCANPKENSKSCQFTTDMLGNCSW 162

  Fly   142 -IDDSWGYMSGTPCILIKITQALGFQAVTYDDALTLPEYAPDELFDYVVGLGSEERFNRIWVSCQ 205
             .|.::||.|||||:.||:.:.:.|    .....|:|          :|...:|..         
 Frog   163 EHDHTFGYKSGTPCLFIKMNRIINF----VPGNKTVP----------LVNCSAEHG--------- 204

  Fly   206 VIEPRVDIQFDYHPVRFFDAEELF-TSGNVFLNESSDDDGPTYKEDPRLRRIISVRLSNIPINED 269
                      |...|.::...:.: |.|..:.........|.|...     :::|:|.|.|:|::
 Frog   205 ----------DLGDVHYYPGNDTYGTIGFQYFPYCGKKMQPNYTNP-----LVAVKLLNPPLNKE 254

  Fly   270 IQIHCK 275
            :.:.||
 Frog   255 LSVVCK 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5250NP_650793.1 None
atp4bNP_001005806.1 Na_K-ATPase 7..280 CDD:459748 49/266 (18%)

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