DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5250 and atp1b2

DIOPT Version :10

Sequence 1:NP_650793.1 Gene:CG5250 / 42308 FlyBaseID:FBgn0038691 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_989070.1 Gene:atp1b2 / 394667 XenbaseID:XB-GENE-1007085 Length:306 Species:Xenopus tropicalis


Alignment Length:303 Identity:60/303 - (19%)
Similarity:113/303 - (37%) Gaps:99/303 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 IGFFFVLGVFTTG---LALVMIANHIYPDRPGCKKFPGLATAPGHHV---GDQKQIM-------- 106
            :.|:.|...|.||   |::.::...|....|   |:....|:||..:   .|..:|:        
 Frog    41 VSFYLVFYAFLTGMFALSMYVMLQTIDEYTP---KYWDRLTSPGLMIRPKTDTLEIVYSISGNSS 102

  Fly   107 WSP-----NNI----KDVANIQRAIM------------RTVKRYGLEGPKR--------LMGCN- 141
            |:|     |::    .|...:|:..:            ..|:.|    ||:        |..|: 
 Frog   103 WAPYVSQLNSMLDPYNDTVQMQQGSVCPSGVFNKQDDTGDVRNY----PKKACQFLRSSLGDCSG 163

  Fly   142 -IDDSWGYMSGTPCILIKITQALGFQAVTYDDALTLPEYAPDELFDYVVGLGSEERFNRIWVSCQ 205
             .|.::||.:|:||:|||:.:.:.|          .|...|        .|.:    ..|.::|.
 Frog   164 LTDPTYGYSTGSPCLLIKMNKIINF----------YPGVIP--------SLSN----TSITINCT 206

  Fly   206 VIEPRVDIQFDYHPVRFFDAEELFTSGNVFLNESSDDDG---------PTYKEDPRLRR-----I 256
            .....:|        :...:...:.|.|. .|.:|:...         |.|..  |.::     :
 Frog   207 GTTANMD--------QMLGSRTYYPSSNP-SNGTSNGTSLGTMDLMYFPYYGN--RAQKNYSQPL 260

  Fly   257 ISVRLSNIPINEDIQIHCKAWAKNIPLHMVTVKMLVRLTAPVH 299
            ::|:..|:.:|:|:.:.|:|.|.||..:....|...|::..:|
 Frog   261 VAVKFYNLTLNQDLYVQCRANAVNINTNDSQDKFSGRVSFKLH 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5250NP_650793.1 None
atp1b2NP_989070.1 Na_K-ATPase 7..299 CDD:459748 59/297 (20%)

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