DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5250 and nrv2

DIOPT Version :10

Sequence 1:NP_650793.1 Gene:CG5250 / 42308 FlyBaseID:FBgn0038691 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_477168.1 Gene:nrv2 / 33953 FlyBaseID:FBgn0015777 Length:323 Species:Drosophila melanogaster


Alignment Length:279 Identity:62/279 - (22%)
Similarity:102/279 - (36%) Gaps:70/279 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KLLLYFIGFFFVLGVFTTGLALVMIANHIY--------P----DRPGCKKFPGLATAPGHHVGD- 101
            |:.::::.|:.||.      |||.|....:        |    ||......|||...|...|.: 
  Fly    50 KIGIFYVAFYGVLA------ALVAICMWAFFQTLDPRIPKWTLDRSLIGTNPGLGFRPLPPVDNV 108

  Fly   102 QKQIMW----SPNNIKDVANIQRAIMRTVKRYGL--------------EGPKRLMGCNID----- 143
            :..::|    ...|.|...:.....:...|..||              :.|.:...|::|     
  Fly   109 ESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLTPGRGQNIYNCDYNQPPPKGQVCDVDIKTWS 173

  Fly   144 -----DSWGYMSGTPCILIKITQALGFQAVTYDDALTLPEYAPDELFDYV--VGLGSEERFNRIW 201
                 :::.|....|||.:|:.:..|:....|:.:..||...|..|..|:  |.....|:.|.||
  Fly   174 PCTKENNYSYHKSAPCIFLKLNKIYGWIPEYYNRSNDLPANMPASLKTYIAEVEKTQPEKLNTIW 238

  Fly   202 VSCQVIEPRVDIQ----FDYHPVRFFDAEELFTSGNVFLNESSDDDGPTYKEDPRLRRIISVRLS 262
            |||:...| .|.:    .:|.|:|.|       .|..:         |....:..|..:::|...
  Fly   239 VSCEGENP-ADQENIGAVNYLPIRGF-------PGYFY---------PYQNSEGYLSPLVAVHFQ 286

  Fly   263 NIPINEDIQIHCKAWAKNI 281
            .......|.:.|:|||:||
  Fly   287 RPKRGIIINVECRAWARNI 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5250NP_650793.1 None
nrv2NP_477168.1 Na_K-ATPase 18..317 CDD:459748 62/279 (22%)

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