DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5250 and Atp1b1

DIOPT Version :9

Sequence 1:NP_650793.1 Gene:CG5250 / 42308 FlyBaseID:FBgn0038691 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_037245.2 Gene:Atp1b1 / 25650 RGDID:2170 Length:304 Species:Rattus norvegicus


Alignment Length:298 Identity:65/298 - (21%)
Similarity:119/298 - (39%) Gaps:109/298 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 FIKLLLYFIGFFFVL-GVFTTGLALVMIA----NHIYPDR---PGCKKFPGLATAPGHHVGDQKQ 104
            :.|:||:::.|:..| |:|...:.::::.    ...|.||   ||..:.|.:         .:.:
  Rat    32 WFKILLFYVIFYGCLAGIFIGTIQVMLLTISELKPTYQDRVAPPGLTQIPQI---------QKTE 87

  Fly   105 IMWSPNNIKD----VANIQRAI-----------------------------------MRTVKRYG 130
            |.:.||:.|.    |.||.|.:                                   .|.|.|:.
  Rat    88 ISFRPNDPKSYEAYVLNIIRFLEKYKDSAQKDDMIFEDCGSMPSEPKERGEFNHERGERKVCRFK 152

  Fly   131 LEGPKRLMGCNIDDSWGYMSGTPCILIKITQALGFQ--------AVTYDDALTLPEYAPDELFDY 187
            |:......|.| |:|:||..|.|||:||:.:.|||:        ..||  .||: :|.|:.|...
  Rat   153 LDWLGNCSGLN-DESYGYKEGKPCIIIKLNRVLGFKPKPPKNESLETY--PLTM-KYNPNVLPVQ 213

  Fly   188 VVGLGSEERFNRIWVSCQVIEPRVDIQ------FDYHPVRFFDAEELFTSGNVFLNESSDDDGPT 246
            ..|...|::           :...:|:      |...|::::                     |.
  Rat   214 CTGKRDEDK-----------DKVGNIEYFGMGGFYGFPLQYY---------------------PY 246

  Fly   247 YKE--DPR-LRRIISVRLSNIPINEDIQIHCKAWAKNI 281
            |.:  .|: |:.:::|:.:|:.::.:|:|.|||:.:||
  Rat   247 YGKLLQPKYLQPLLAVQFTNLTLDTEIRIECKAYGENI 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5250NP_650793.1 Na_K-ATPase <143..281 CDD:298651 36/154 (23%)
Atp1b1NP_037245.2 Na_K_ATPase_bet 1..304 CDD:273446 65/298 (22%)
immunoglobulin-like. /evidence=ECO:0000250 191..304 25/129 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354504
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11523
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.800

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