DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5250 and Atp1b3

DIOPT Version :9

Sequence 1:NP_650793.1 Gene:CG5250 / 42308 FlyBaseID:FBgn0038691 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_031528.1 Gene:Atp1b3 / 11933 MGIID:107788 Length:278 Species:Mus musculus


Alignment Length:163 Identity:39/163 - (23%)
Similarity:55/163 - (33%) Gaps:43/163 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LLLY--FIGFFFVLGVFTTGLALVMIANHI--YPDR---PGCKKFPGLATAPGHHVGDQKQIMWS 108
            ||.|  |.||...|..||....|..:.:.:  |.|:   ||...||...||..:...     |..
Mouse    40 LLFYLVFYGFLAALFTFTMWAMLQTLNDEVPKYRDQIPSPGLMVFPKPQTALEYTFS-----MSE 99

  Fly   109 PNNIKDVANIQRAIMRTVKRYGLEGPKRLMGCN----------------------------IDDS 145
            |...|.:.....:.:   |.|.:|..|.|..|.                            .|.:
Mouse   100 PQTYKKLVEDLESFL---KPYSVEEQKNLTSCPDGAPFIQHGPDYRACQFPVSLLEECSGVTDAN 161

  Fly   146 WGYMSGTPCILIKITQALGFQAVTYDDALTLPE 178
            :||..|.||||:|:.:.:......|.....||:
Mouse   162 FGYSKGQPCILVKMNRIIDLIPDGYPQISCLPK 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5250NP_650793.1 Na_K-ATPase <143..281 CDD:298651 12/36 (33%)
Atp1b3NP_031528.1 Na_K-ATPase 1..278 CDD:298651 39/163 (24%)
immunoglobulin-like. /evidence=ECO:0000250 186..278 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850788
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3927
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000357
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11523
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

Return to query results.
Submit another query.