DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11703 and shbg

DIOPT Version :10

Sequence 1:NP_650792.1 Gene:CG11703 / 42307 FlyBaseID:FBgn0038690 Length:353 Species:Drosophila melanogaster
Sequence 2:NP_001007152.1 Gene:shbg / 322604 ZFINID:ZDB-GENE-030131-1324 Length:381 Species:Danio rerio


Alignment Length:81 Identity:20/81 - (24%)
Similarity:29/81 - (35%) Gaps:22/81 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 DTPDDLPKEAPASLQDTVGK----LGNTPKI----------WITCEVTNGPKPEMVFYPGPYFEA 223
            |...:.|.| ||:|..|:.|    :.:.||:          |     .||........||....|
Zfish   276 DGSTEFPSE-PATLTFTILKNSLVVNSKPKVKSETLDFLSMW-----KNGMLLTFGGVPGDSEVA 334

  Fly   224 SEN--MRGVTRVVAIQ 237
            ..|  :||....:.:|
Zfish   335 KSNPYLRGCLEKIVVQ 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11703NP_650792.1 Na_K-ATPase 40..267 CDD:471796 20/81 (25%)
shbgNP_001007152.1 LamG 65..191 CDD:473984
LamG 214..349 CDD:473984 19/78 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.