DRSC/TRiP Functional Genomics Resources

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Protein Alignment vib and LPIN2

DIOPT Version :9

Sequence 1:NP_001262726.1 Gene:vib / 42306 FlyBaseID:FBgn0267975 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_005258234.1 Gene:LPIN2 / 9663 HGNCID:14450 Length:933 Species:Homo sapiens


Alignment Length:232 Identity:45/232 - (19%)
Similarity:76/232 - (32%) Gaps:77/232 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 AEASKENTGGGEGIEVLKN----EPFEDFPLLGGKYNSGQYTYKIYHLQSKVPAYIRLLAPK-GS 85
            |..::.::...||.:.|:.    :|....||..|...|    ||         ..:||.:.: ..
Human   634 ARPAENDSSSDEGSQELEESITVDPIPTEPLSHGSTTS----YK---------KSLRLSSDQIAK 685

  Fly    86 LEIHEEAWNAYPYCRTIITNPGYMDKNFKIDIYSQHIENDLGTVDNVHELTPDKLKVREIVHIDI 150
            |::|:                |..|..|.|....|......||                 :::..
Human   686 LKLHD----------------GPNDVVFSITTQYQGTCRCAGT-----------------IYLWN 717

  Fly   151 ANDPVLPADYKPDEDPTTYQSKKTGR-GPLVGSDW------KKHVNPVMTCYKLVTCEFKWFGLQ 208
            .||.::.:|.    |.|..:|...|: .|.:|.||      |.:.:.....||.:.|..:..|:.
Human   718 WNDKIIISDI----DGTITKSDALGQILPQLGKDWTHQGIAKLYHSINENGYKFLYCSARAIGMA 778

  Fly   209 TRVENF---------------IQKSERRLFTNFHRQV 230
            .....:               :..|...||:.|||:|
Human   779 DMTRGYLHWVNDKGTILPRGPLMLSPSSLFSAFHREV 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vibNP_001262726.1 SRPBCC_PITPNA-B_like 2..261 CDD:176897 45/232 (19%)
LPIN2XP_005258234.1 Lipin_N 38..143 CDD:282436
Lipin_mid 506..596 CDD:293481
LNS2 674..899 CDD:285447 34/179 (19%)
AF1Q <913..>932 CDD:259154
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5083
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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