DRSC/TRiP Functional Genomics Resources

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Protein Alignment vib and pitpnc1

DIOPT Version :10

Sequence 1:NP_001262726.1 Gene:vib / 42306 FlyBaseID:FBgn0267975 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001039199.1 Gene:pitpnc1 / 734057 XenbaseID:XB-GENE-959703 Length:329 Species:Xenopus tropicalis


Alignment Length:263 Identity:108/263 - (41%)
Similarity:162/263 - (61%) Gaps:13/263 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIKEFRVTLPLTVEEYQVAQLFSVAEASKENTGGGEGIEVLKNEPFEDFPLLGGKYNSGQYTYK 65
            |.:||:|:.:|||||||::.||:.:::.|.|.:..|||:||::|||:|| |:.|    .||.|.|
 Frog     1 MLLKEYRICMPLTVEEYRIGQLYMISKHSHEQSERGEGVEVVQNEPYED-PVHG----QGQLTEK 60

  Fly    66 IYHLQSKVPAYIRLLAPKGSLEIHEEAWNAYPYCRTIITNPGYMDKNFKIDIYSQHIENDLGTVD 130
            ..:|.||:|::.|.:.|| ...:.|:|||.|||..|..| ..::.| |.|.|.::: |::.|:.|
 Frog    61 RVYLNSKLPSWARAVVPK-IFYVTEKAWNYYPYTITEYT-CSFLPK-FSIHIETKY-EDNKGSND 121

  Fly   131 NVHELTPDKLKVREIVHIDIANDPVLPADYKPDEDPTTYQSKKTGRGPLVGSDWKKHVNPVMTCY 195
            |:.| :..|...|||..:|||.|.:....||..|||..:.|:|||||.| ...|::...|:|..|
 Frog   122 NIFE-SEAKDAEREICFVDIACDEIPERYYKESEDPKNFVSEKTGRGQL-KEGWREAQEPIMCSY 184

  Fly   196 KLVTCEFKWFGLQTRVENFIQKSERRLFTNFHRQVFCSTDRWYGLTMEDIRAIEDQTKEELDKAR 260
            |||..:|:.:|||:|||.|:.|..|.:....|||.|...|.||.:||:::|..|..|:|..:  |
 Frog   185 KLVAVKFEVWGLQSRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREYERTTQEATN--R 247

  Fly   261 QVG 263
            ::|
 Frog   248 KIG 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vibNP_001262726.1 SRPBCC_PITPNA-B_like 2..261 CDD:176897 105/258 (41%)
pitpnc1NP_001039199.1 SRPBCC_PITPNC1_like 2..250 CDD:176899 106/260 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..329
Blue background indicates that the domain is not in the aligned region.

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