DRSC/TRiP Functional Genomics Resources

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Protein Alignment vib and pitpnc1l

DIOPT Version :10

Sequence 1:NP_001262726.1 Gene:vib / 42306 FlyBaseID:FBgn0267975 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001016639.1 Gene:pitpnc1l / 549393 XenbaseID:XB-GENE-5779888 Length:333 Species:Xenopus tropicalis


Alignment Length:257 Identity:102/257 - (39%)
Similarity:155/257 - (60%) Gaps:16/257 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIKEFRVTLPLTVEEYQVAQLFSVAEASKENTGGGEGIEVLKNEPFEDFPLLGGKYNSGQYTYK 65
            |.:||:|:.:|||||||::.||:.:::.|.|.:..|||:||:.|||:|     ...:..||||.|
 Frog     1 MLLKEYRICMPLTVEEYRIGQLYMISKHSHEQSSDGEGVEVIINEPYE-----SAVHGKGQYTEK 60

  Fly    66 IYHLQSKVPAYIRLLAPKGSLEIHEEAWNAYPYCRTIITNPGYMDKNFKIDIYSQHIENDLGTVD 130
            ..:|..|:||:||...|| ...|.|:|||.|||..|..| ..::.| |:|.|.:: .||:.|:..
 Frog    61 RVYLNRKLPAWIRGFIPK-IFYITEKAWNYYPYTVTEYT-CSFLPK-FQIRIETK-FENNNGSNA 121

  Fly   131 NV--HELTPDKLKVREIVHIDIANDPVLPADYKPDEDPTTYQSKKTGRGPLVGSDWKKHVNPVMT 193
            .|  .:.||:.    ::..:|||.|.:....||..||..::.|.|||||||: .:|::...|:|.
 Frog   122 QVFGDKPTPED----DVCFVDIAADDITEGYYKKSEDLRSFHSVKTGRGPLL-DNWRETSEPIMC 181

  Fly   194 CYKLVTCEFKWFGLQTRVENFIQKSERRLFTNFHRQVFCSTDRWYGLTMEDIRAIEDQTKEE 255
            .||||..:|:.:|.|:|||:|:.|:.|.:....|||.....|.|||:::||:|..|.:.:||
 Frog   182 SYKLVAAKFEVYGFQSRVESFVHKNIRDILLAGHRQAVAWMDEWYGMSLEDVRRFEKKLQEE 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vibNP_001262726.1 SRPBCC_PITPNA-B_like 2..261 CDD:176897 101/256 (39%)
pitpnc1lNP_001016639.1 SRPBCC 2..248 CDD:472699 101/256 (39%)

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