DRSC/TRiP Functional Genomics Resources

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Protein Alignment vib and pitpnbl

DIOPT Version :9

Sequence 1:NP_001262726.1 Gene:vib / 42306 FlyBaseID:FBgn0267975 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_998608.1 Gene:pitpnbl / 406752 ZFINID:ZDB-GENE-040426-2791 Length:270 Species:Danio rerio


Alignment Length:276 Identity:161/276 - (58%)
Similarity:203/276 - (73%) Gaps:14/276 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IKEFRVTLPLTVEEYQVAQLFSVAEASKENTGGGEGIEVLKNEPFEDFPLLGGKYNSGQYTYKIY 67
            ||:::|.||.:||||||.||:|||||||.|||||||||||:|||:|.      :...||||:|||
Zfish     4 IKQYQVLLPCSVEEYQVGQLYSVAEASKNNTGGGEGIEVLRNEPYEK------EGEKGQYTHKIY 62

  Fly    68 HLQSKVPAYIRLLAPKGSLEIHEEAWNAYPYCRTIITNPGYMDKNFKIDIYSQHIENDLGTVDNV 132
            |:.||||.:|::.||:|:|..||:|||||||||||:||. ||..:|.|.|.:.| :.|:||.:|.
Zfish    63 HIHSKVPGFIQMFAPEGALVFHEKAWNAYPYCRTIVTNE-YMKDDFFIKIETWH-KPDIGTTENP 125

  Fly   133 HELTPDKLKVREIVHIDIAN-DPVLPADYKPDEDPTTYQSKKTGRGPLVGSDWKKHVN----PVM 192
            |.|.|::.:..|||.||||: ..|...|||.:|||..|.|:||||||| |.:|||.::    |.|
Zfish   126 HGLPPEEWEDIEIVPIDIADRSQVDDVDYKAEEDPAIYHSEKTGRGPL-GPEWKKELHNGNCPYM 189

  Fly   193 TCYKLVTCEFKWFGLQTRVENFIQKSERRLFTNFHRQVFCSTDRWYGLTMEDIRAIEDQTKEELD 257
            |.|||||..|:|:|||.||||||.|.|:|||||||||:||..|||..|||:|||.:|::|:.|||
Zfish   190 TAYKLVTVHFRWWGLQGRVENFIHKQEKRLFTNFHRQLFCWLDRWVDLTMDDIRRMEEETQRELD 254

  Fly   258 KARQVGEVRGMRADAD 273
            :.|..|.||||:|..|
Zfish   255 QMRSQGSVRGMKAGED 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vibNP_001262726.1 SRPBCC_PITPNA-B_like 2..261 CDD:176897 153/262 (58%)
pitpnblNP_998608.1 SRPBCC_PITPNA-B_like 3..257 CDD:176897 153/261 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580333
Domainoid 1 1.000 307 1.000 Domainoid score I1325
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 324 1.000 Inparanoid score I2471
OMA 1 1.010 - - QHG54293
OrthoDB 1 1.010 - - D522789at33208
OrthoFinder 1 1.000 - - FOG0002025
OrthoInspector 1 1.000 - - otm24569
orthoMCL 1 0.900 - - OOG6_103092
Panther 1 1.100 - - O PTHR10658
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4220
SonicParanoid 1 1.000 - - X1329
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.940

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