DRSC/TRiP Functional Genomics Resources

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Protein Alignment vib and pitpnb.2

DIOPT Version :10

Sequence 1:NP_001262726.1 Gene:vib / 42306 FlyBaseID:FBgn0267975 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_989122.1 Gene:pitpnb.2 / 394727 XenbaseID:XB-GENE-949250 Length:271 Species:Xenopus tropicalis


Alignment Length:274 Identity:168/274 - (61%)
Similarity:205/274 - (74%) Gaps:15/274 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IKEFRVTLPLTVEEYQVAQLFSVAEASKENTGGGEGIEVLKNEPFEDFPLLGGKYNSGQYTYKIY 67
            |||:||.||::||||||.||||||||||:|||||||||||||||:|    |.|:  .||||:|||
 Frog     4 IKEYRVLLPVSVEEYQVGQLFSVAEASKDNTGGGEGIEVLKNEPYE----LDGE--KGQYTHKIY 62

  Fly    68 HLQSKVPAYIRLLAPKGSLEIHEEAWNAYPYCRTIITNPGYMDKNFKIDIYSQHIENDLGTVDNV 132
            |||||||.:::::||:|||..||:|||||||||||:||. ||..||.:.|.:.| :.|.|..:||
 Frog    63 HLQSKVPGFVKMVAPEGSLVFHEKAWNAYPYCRTIVTNE-YMKDNFFVKIETWH-KPDFGDQENV 125

  Fly   133 HELTPDKLKVREIVHIDIA-NDPVLPADYKPDEDPTTYQSKKTGRGPLVGSDWKKHVN-----PV 191
            |.|..:..|..|:|.|||| |..:...|||.:|||..|:|:||||||| ..||||.:.     |.
 Frog   126 HGLDSNTWKEVEVVPIDIADNSQINEGDYKANEDPACYRSEKTGRGPL-KQDWKKELANNPSCPH 189

  Fly   192 MTCYKLVTCEFKWFGLQTRVENFIQKSERRLFTNFHRQVFCSTDRWYGLTMEDIRAIEDQTKEEL 256
            |..|||||.:|:|:|||.:||.||.|.|:|||||||||:|||.|||..|||||||.:||:|::||
 Frog   190 MCAYKLVTVKFQWWGLQGKVERFIHKQEKRLFTNFHRQLFCSLDRWVELTMEDIRRMEDETQKEL 254

  Fly   257 DKARQVGEVRGMRA 270
            |:.||.|.||||.|
 Frog   255 DEMRQKGAVRGMSA 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vibNP_001262726.1 SRPBCC_PITPNA-B_like 2..261 CDD:176897 160/263 (61%)
pitpnb.2NP_989122.1 SRPBCC_PITPNA-B_like 3..259 CDD:176897 160/263 (61%)

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