DRSC/TRiP Functional Genomics Resources

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Protein Alignment vib and rdgBbeta

DIOPT Version :10

Sequence 1:NP_001262726.1 Gene:vib / 42306 FlyBaseID:FBgn0267975 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_061504253.1 Gene:rdgBbeta / 3291020 VectorBaseID:AGAMI1_010884 Length:268 Species:Anopheles gambiae


Alignment Length:260 Identity:105/260 - (40%)
Similarity:156/260 - (60%) Gaps:11/260 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IKEFRVTLPLTVEEYQVAQLFSVAEASKENTGGGEGIEVLKNEPFEDFPLLGGKYNSGQYTYKIY 67
            |||:|:.:|||||||::.||:.:|..|.|.:..|||:||::|:...|     .::..||||.|..
Mosquito     4 IKEYRICMPLTVEEYKIGQLYMIARHSLEQSDDGEGVEVIENKECFD-----PEHGKGQYTEKRI 63

  Fly    68 HLQSKVPAYIRLLAPKGSLEIHEEAWNAYPYCRTIITNPGYMDKNFKIDIYSQHIENDLGTVDNV 132
            ||.|::|.:::.:.|| ...:.|:.||.|||..|..| ..::.| ..|.|.:: .|::.||.:|.
Mosquito    64 HLSSRLPYWLQAVCPK-VFYVIEKGWNYYPYTVTEYT-CSFIPK-LHIRILTR-FEDNAGTSENC 124

  Fly   133 HELTPDKLKVREIVHIDIANDPVLPADYKPDEDPTTYQSKKTGRGPLVGSDWKKHVNPVMTCYKL 197
            ..|..:.|..|.:.|:|||.:......||.:|||..::|:.||||||| ..|::...|:|..|||
Mosquito   125 LNLPEETLANRIVDHVDIAFEEPSEKHYKKEEDPKFFKSRITGRGPLV-EGWRQTDEPMMCSYKL 188

  Fly   198 VTCEFKWFGLQTRVENFIQKSERRLFTNFHRQVFCSTDRWYGLTMEDIRAIE-DQTKEELDKARQ 261
            |...|:.:|||||||:||||..|.:....|||.|...|.|:|::::|:|..| |:..|..||.||
Mosquito   189 VEASFEVWGLQTRVEDFIQKCIRDVLLLGHRQAFAWIDEWHGMSIDDVRMYEKDKQTEANDKLRQ 253

  Fly   262  261
            Mosquito   254  253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vibNP_001262726.1 SRPBCC_PITPNA-B_like 2..261 CDD:176897 103/258 (40%)
rdgBbetaXP_061504253.1 None

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