DRSC/TRiP Functional Genomics Resources

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Protein Alignment vib and Pitpnm2

DIOPT Version :10

Sequence 1:NP_001262726.1 Gene:vib / 42306 FlyBaseID:FBgn0267975 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_006530277.1 Gene:Pitpnm2 / 19679 MGIID:1336192 Length:1385 Species:Mus musculus


Alignment Length:266 Identity:118/266 - (44%)
Similarity:174/266 - (65%) Gaps:19/266 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIKEFRVTLPLTVEEYQVAQLFSVAEASKENT-GGGEGIEVLKNEPFEDFPLLGGKYNSGQYTY 64
            |.|||:|:.||:||:||::|||:.:.:.|:..| |.|.|:|:|:|.|:.|.|  ||   |||||:
Mouse     1 MIIKEYRIPLPMTVDEYRIAQLYMIQKKSRNETHGQGSGVEILENRPYTDGP--GG---SGQYTH 60

  Fly    65 KIYHLQSKVPAYIRLLAPKGSLEIHEEAWNAYPYCRTIITNPGYMDKNFKIDIYSQHIENDLGTV 129
            |:||:...:|.:.|.:.||.:|.:.||:||||||.||..|.| :::| |.|||.:.: :.|.|..
Mouse    61 KVYHVGMHIPGWFRSILPKAALRVVEESWNAYPYTRTRFTCP-FVEK-FSIDIETFY-KTDTGEN 122

  Fly   130 DNVHELTP-DKLK-VREIVHIDIANDPVLPADYKPDEDPTTYQSKKTGRGPLVGSDW----KKHV 188
            :||..|:| :|.: :.:|  |||..|||.|::||.:|||..:||.||.|||| ..:|    ||.:
Mouse   123 NNVFNLSPVEKSQLITDI--IDIVKDPVPPSEYKTEEDPKLFQSVKTCRGPL-SENWIQEYKKRL 184

  Fly   189 NPVMTCYKLVTCEFKWFGLQTRVENFIQKSE-RRLFTNFHRQVFCSTDRWYGLTMEDIRAIEDQT 252
            .|:|..|||...||:::|:|:::|.||..:. ||:....|||.:|..|.|||||||.||.:|.:.
Mouse   185 LPIMCAYKLCKVEFRYWGMQSKIERFIHDTGLRRVMVRAHRQAWCWQDEWYGLTMEKIRELEREV 249

  Fly   253 KEELDK 258
            :..|.:
Mouse   250 QLMLSR 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vibNP_001262726.1 SRPBCC_PITPNA-B_like 2..261 CDD:176897 117/265 (44%)
Pitpnm2XP_006530277.1 SRPBCC_PITPNM1-2_like 1..258 CDD:176898 118/266 (44%)
DDHD 701..998 CDD:460725
LNS2 1144..1275 CDD:197870
Blue background indicates that the domain is not in the aligned region.

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