DRSC/TRiP Functional Genomics Resources

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Protein Alignment vib and LOC100493137

DIOPT Version :9

Sequence 1:NP_001262726.1 Gene:vib / 42306 FlyBaseID:FBgn0267975 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_002941097.1 Gene:LOC100493137 / 100493137 -ID:- Length:322 Species:Xenopus tropicalis


Alignment Length:270 Identity:107/270 - (39%)
Similarity:157/270 - (58%) Gaps:23/270 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIKEFRVTLPLTVEEYQVAQLFSVAEASKENTGGGEGIEVLKNEPFEDFPLLGGKYNSGQYTYK 65
            |.:||:|:.:|||.|||::.||:::::.|.:.:..|||:||::|....| |:.|    .||||.|
 Frog     1 MLVKEYRICMPLTTEEYRIGQLYTISKHSHQESDRGEGVEVMENREHHD-PVHG----YGQYTEK 60

  Fly    66 IYHLQSKVPAYIRLLAPKGSLEIHEEAWNAYPYCRTIITNPGYMDKNFKIDIYSQHIE----NDL 126
            ..||.||:|::.|.:.|: ...|.|:|||.|||..|..| ..::.|      :|.|||    :|.
 Frog    61 RVHLSSKLPSWARAVVPR-MFYICEKAWNYYPYTVTEYT-CSFLPK------FSIHIETRYSDDC 117

  Fly   127 GTVDNVHELTPDKLK-VREIVHIDIANDPVLPADYKPDEDPTTYQSKKTGRGPLVGSDWKKHVNP 190
            |..|::.:  ||..: ..|:..||||.|.:....||..||...:.|.:|||||| ...|:.:|.|
 Frog   118 GDNDSIFQ--PDNAEDAHEVSFIDIAYDEIPERYYKSVEDLRHFMSSRTGRGPL-QEGWRHNVRP 179

  Fly   191 VMTCYKLVTCEFKWFGLQTRVENFIQKSERRLFTNFHRQVFCSTDRWYGLTMEDIRAIEDQTKEE 255
            ||..||||..:|:.:|||||||.|:.|..|.|....|||.|...|.|||:||.::|..|.:|:..
 Frog   180 VMCSYKLVNVKFEVWGLQTRVEQFVHKVIRDLLLVGHRQAFAWVDEWYGMTMVEVREYEKETQAA 244

  Fly   256 LDKARQVGEV 265
            .::  ::|.|
 Frog   245 TNE--KIGPV 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vibNP_001262726.1 SRPBCC_PITPNA-B_like 2..261 CDD:176897 104/263 (40%)
LOC100493137XP_002941097.1 SRPBCC 2..250 CDD:387369 104/265 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D951268at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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