DRSC/TRiP Functional Genomics Resources

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Protein Alignment vib and pitpnab

DIOPT Version :9

Sequence 1:NP_001262726.1 Gene:vib / 42306 FlyBaseID:FBgn0267975 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_002663601.1 Gene:pitpnab / 100333060 ZFINID:ZDB-GENE-110408-51 Length:270 Species:Danio rerio


Alignment Length:279 Identity:168/279 - (60%)
Similarity:209/279 - (74%) Gaps:15/279 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQIKEFRVTLPLTVEEYQVAQLFSVAEASKENTGGGEGIEVLKNEPFEDFPLLGGKYNSGQYTYK 65
            |.||||||.||::||||||.||:|||||||..||||||:|||||||:|.    .|:  .||||:|
Zfish     1 MLIKEFRVILPISVEEYQVGQLYSVAEASKNETGGGEGVEVLKNEPYEK----DGE--KGQYTHK 59

  Fly    66 IYHLQSKVPAYIRLLAPKGSLEIHEEAWNAYPYCRTIITNPGYMDKNFKIDIYSQHIENDLGTVD 130
            |||||||||:::|:|||..:|.|||:||||||||||:|||. ||.:||.|.|.:.| :.|:|..|
Zfish    60 IYHLQSKVPSFVRMLAPASALNIHEKAWNAYPYCRTVITNE-YMKENFLIKIETWH-KPDMGQQD 122

  Fly   131 NVHELTPDKLKVREIVHIDIAN-DPVLPADYKPDEDPTTYQSKKTGRGPLVGSDWKKHVN----- 189
            |||.|.||..|..::|:||||: ..|.|.||||:|||:.|:|.||||||| |.|||:.:.     
Zfish   123 NVHGLDPDTWKKVDVVYIDIADRSQVEPKDYKPEEDPSKYKSVKTGRGPL-GPDWKRELPKKTDC 186

  Fly   190 PVMTCYKLVTCEFKWFGLQTRVENFIQKSERRLFTNFHRQVFCSTDRWYGLTMEDIRAIEDQTKE 254
            |.|..|||||.:|||:|||.:|||||||.|:|||||||||:||..|:|..|.|:|||.:|::|::
Zfish   187 PHMCAYKLVTVKFKWWGLQNKVENFIQKQEKRLFTNFHRQLFCWIDKWIELNMDDIRRMEEETRK 251

  Fly   255 ELDKARQVGEVRGMRADAD 273
            |||:.|....|:||.|..|
Zfish   252 ELDEMRVKDPVKGMVALED 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vibNP_001262726.1 SRPBCC_PITPNA-B_like 2..261 CDD:176897 161/264 (61%)
pitpnabXP_002663601.1 SRPBCC_PITPNA-B_like 2..257 CDD:176897 161/263 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 307 1.000 Domainoid score I1325
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 324 1.000 Inparanoid score I2471
OMA 1 1.010 - - QHG54293
OrthoDB 1 1.010 - - D522789at33208
OrthoFinder 1 1.000 - - FOG0002025
OrthoInspector 1 1.000 - - otm24569
orthoMCL 1 0.900 - - OOG6_103092
Panther 1 1.100 - - O PTHR10658
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4220
SonicParanoid 1 1.000 - - X1329
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1111.100

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