DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cry and CRY3

DIOPT Version :9

Sequence 1:NP_732407.1 Gene:cry / 42305 FlyBaseID:FBgn0025680 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_568461.3 Gene:CRY3 / 832554 AraportID:AT5G24850 Length:569 Species:Arabidopsis thaliana


Alignment Length:509 Identity:132/509 - (25%)
Similarity:208/509 - (40%) Gaps:99/509 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RGANVIWFRHGLRLHDNPALLAALADKDQGIALIPVFIFDGESAGTKN------VGYNRMRFLLD 62
            :|..::|||:.||:.||.||..|.:..|   .::||:..|.....|.:      .|..|..||::
plant    83 KGVTILWFRNDLRVLDNDALYKAWSSSD---TILPVYCLDPRLFHTTHFFNFPKTGALRGGFLME 144

  Fly    63 SLQDIDDQLQAATDGRG-RLLVFEGEPAYIFRRLHEQ-----VRLHR-ICIEQ-DCEPIWNERDE 119
            .|.|:...|..    || .||:..|:|..|...|.:.     |..|: .|.|: |.|.:.|:   
plant   145 CLVDLRKNLMK----RGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCSEEVDVERLVNQ--- 202

  Fly   120 SIRSLCRELNIDFVEKVSHTLWDPQLVIETNGGIP------PLTYQMFLHTVQI----------- 167
               .|.|..|...:|    .:|...:..:.:  :|      |..|..|..:|:.           
plant   203 ---GLKRVGNSTKLE----LIWGSTMYHKDD--LPFDVFDLPDVYTQFRKSVEAKCSIRSSTRIP 258

  Fly   168 IGLPPRPTADARLEDATFVEL--DP-EFCRSLKLFEQLPTPEHFNVYGDN--MGFLAKINWRGGE 227
            :.|.|.|:.|...:..|..:|  :| |..|.::.           |.|::  :|.:.:..|:   
plant   259 LSLGPTPSVDDWGDVPTLEKLGVEPQEVTRGMRF-----------VGGESAGVGRVFEYFWK--- 309

  Fly   228 TQALLLLDERLKVEQHAFERGFYLPNQALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQ 292
                   .:.|||.:.. ..|...|        |.....|..|.|||:|.|..|..|....|   
plant   310 -------KDLLKVYKET-RNGMLGP--------DYSTKFSPWLAFGCISPRFIYEEVQRYEK--- 355

  Fly   293 LRACVRGVQMTGGAHITGQLIWREYFYTMSVNNPNYDRMEGNDICLSIPWAKPNENLLQSWRLGQ 357
                 ..|.......:..:||||:||..:|:...|.....|....:...|:: ::.|.:|||..:
plant   356 -----ERVANNSTYWVLFELIWRDYFRFLSIKCGNSLFHLGGPRNVQGKWSQ-DQKLFESWRDAK 414

  Fly   358 TGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRG-GLWQSWEHGLQHFLKYLLDADWSVCAGNWM 421
            ||:||||..|::|...|::.:..|..|.:||.|. ||  .|..|.:.|...|||.|.....|||.
plant   415 TGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGL--DWRMGAEWFETCLLDYDPCSNYGNWT 477

  Fly   422 WVSSSAFERLLDSSLVTCPVALAKRLDPDGTYIKQYVPELMNVPKEFVHEPWRM 475
            :.:....:...| ...:.| ..|:..||:|.|:..::.:|..:|||..|.|.|:
plant   478 YGAGVGNDPRED-RYFSIP-KQAQNYDPEGEYVAFWLQQLRRLPKEKRHWPGRL 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cryNP_732407.1 PhrB 4..504 CDD:223492 132/509 (26%)
DNA_photolyase 8..175 CDD:279247 49/197 (25%)
FAD_binding_7 310..510 CDD:281440 54/167 (32%)
CRY3NP_568461.3 crypto_DASH 84..515 CDD:274288 125/492 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0415
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D378952at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X403
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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