DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cry and cry1

DIOPT Version :9

Sequence 1:NP_732407.1 Gene:cry / 42305 FlyBaseID:FBgn0025680 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001017311.2 Gene:cry1 / 550065 XenbaseID:XB-GENE-946007 Length:618 Species:Xenopus tropicalis


Alignment Length:525 Identity:211/525 - (40%)
Similarity:303/525 - (57%) Gaps:48/525 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GANVI-WFRHGLRLHDNPALLAALADKDQGIALIPVFIFDGESAGTKNVGYNRMRFLLDSLQDID 68
            |.|.: |||.||||||||||...:...|   .:..|:|.|...||:.|||.||.||||..|:|:|
 Frog     2 GVNAVHWFRKGLRLHDNPALRECIQGAD---TIRCVYILDPWFAGSSNVGINRWRFLLQCLEDLD 63

  Fly    69 DQLQAATDGRGRLLVFEGEPAYIFRRLHEQVRLHRICIEQDCEPIWNERDESIRSLCRELNIDFV 133
            ..|:..   ..||.|..|:||.:|.||.::.::.::.||.|.||...|||.:|:.|..|..::.:
 Frog    64 ANLRKL---NSRLFVIRGQPADVFPRLFKEWKITKLSIEYDSEPFGKERDAAIKKLASEAGVEVI 125

  Fly   134 EKVSHTLWDPQLVIETNGGIPPLTYQMFLHTVQIIGLPPRPTADARLEDATFVELDPEFCRSLKL 198
            .::||||:|...:||.|||.|||||:.|            .|..:::|.   :|:..|.. :.::
 Frog   126 VRISHTLYDLDKIIELNGGQPPLTYKRF------------QTLISKMEP---LEIPVETI-TAEV 174

  Fly   199 FEQLPTP---EHFNVYG----DNMGF----LAKINWRGGETQALLLLDERLKVEQHAFERGFYLP 252
            .|:..||   :|...||    :.:||    |....|.||||:||..|:..|  |:.|:...|..|
 Frog   175 MEKCTTPVLDDHDEKYGVPSLEELGFDTEGLPSAVWPGGETEALTRLERHL--ERKAWVANFERP 237

  Fly   253 NQALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQMTGGAHITGQLIWREY 317
            .....::..|...:|.:|||||||.|.||:.:.||:|.|:..:       :....:.|||:|||:
 Frog   238 RMNANSLLASTTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNS-------SPPLSLYGQLLWREF 295

  Fly   318 FYTMSVNNPNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRN 382
            |||.:.|||.:|:||||.||:.|||.: |...|..|..|:||||.||..|.||..|||:||..|:
 Frog   296 FYTAATNNPRFDKMEGNPICVQIPWDR-NPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARH 359

  Fly   383 TVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVS-SSAFERLLDSSLVTCPVALAKR 446
            .||.|||||.||.|||.|::.|.:.||||||||.||:|||:| ||.|::...   ..|||...:|
 Frog   360 AVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFH---CYCPVGFGRR 421

  Fly   447 LDPDGTYIKQYVPELMNVPKEFVHEPWRMSAEQQEQYECLIGVHYPERIIDLSMAVKRNMLAMKS 511
            .||:|.||::|:|.|...|.:::::||......|:..:|:|||:||:.:::.:.|.:.|:..||.
 Frog   422 TDPNGDYIRRYLPILKGFPPKYIYDPWNAPETVQKVAKCIIGVNYPKPMVNHAEASRLNIERMKQ 486

  Fly   512 LRNSL 516
            :...|
 Frog   487 IYQQL 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cryNP_732407.1 PhrB 4..504 CDD:223492 207/511 (41%)
DNA_photolyase 8..175 CDD:279247 68/167 (41%)
FAD_binding_7 310..510 CDD:281440 96/200 (48%)
cry1NP_001017311.2 PhrB 6..491 CDD:223492 208/519 (40%)
FAD_binding_7 288..486 CDD:377037 97/201 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D378952at2759
OrthoFinder 1 1.000 - - FOG0000663
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X403
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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