DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cry and cpdp

DIOPT Version :9

Sequence 1:NP_732407.1 Gene:cry / 42305 FlyBaseID:FBgn0025680 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_005168471.1 Gene:cpdp / 394039 ZFINID:ZDB-GENE-040426-1644 Length:534 Species:Danio rerio


Alignment Length:484 Identity:102/484 - (21%)
Similarity:168/484 - (34%) Gaps:125/484 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 WFRHGLRLHDNPALL----AALADK---DQGIALIPVFIFDGESAGTKNVGYNRMRFLLDSLQDI 67
            |.....|:.||.||:    .|||:|   .....|:|.|:         :..|.:..|:|..||::
Zfish    94 WMSRDQRIQDNWALIYSQQLALAEKLPLHICFCLVPKFL---------DATYRQYAFMLKGLQEV 149

  Fly    68 DDQLQAATDGRGRLLVFEGEPAYIFRRLHEQVRLHRI-CIEQDCEPI-----WNERDESIRSLCR 126
            ..:.: :.|....||  .|||.:   .|...|:...| .:..|..|:     |      |.::.:
Zfish   150 VKECK-SLDIEFHLL--SGEPVH---NLPAFVKSWNIGAVVTDFNPLRISLQW------IDTVKK 202

  Fly   127 EL--NIDFVEKVSHTL---WDPQLVIETNGGIPPLTYQMFLHTVQIIGLPPRPTADARLEDATFV 186
            .|  :|.|::..:|.:   |:....:|.  |...:..::..|..:.            |.|...|
Zfish   203 HLPSDIPFIQVDAHNVVPCWEASTKLEY--GARTIRGKITKHLQEF------------LTDMPLV 253

  Fly   187 ELDPEFC--RSLKLF---EQLPTPE-HFNVYGDNMGFLAKINW-RGGETQALLLLDERLKVEQHA 244
            :..| :|  |:.|:.   |.|.:.| ..||        .::.| :.|.|..:.:|:..:....|.
Zfish   254 DTHP-YCASRAAKIIDWEEVLSSLEVDHNV--------CEVEWAQPGTTGGMFMLESFIDQRLHI 309

  Fly   245 FERGFYLPNQALPNIHDSPKSMSAHLRFGCLSVRRFYWSVHDLFKNVQLRACVRGVQMTGGAHIT 309
            |......||.      |:...:|..:..|.||.:|....|..          .:....:..:.|.
Zfish   310 FATHRNNPNS------DAVSHLSPWIHAGQLSAQRVVMQVKR----------KKNASESVASFIE 358

  Fly   310 GQLIWREYFYTMSVNNPNYDRMEGNDICLSIPWAKP--------------NENLLQSWRLGQTGF 360
            ..::.||........|.|||.:.|     :..|||.              .:..|:|   .:|..
Zfish   359 EIVVRRELADNFCFYNQNYDNISG-----AYDWAKKTLQEHAKDRRQYLYTKKELES---AETHD 415

  Fly   361 PLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLD--------------A 411
            .|.:.|.||||.||.:|..||...|..:..   |.:..........||.|              .
Zfish   416 QLWNAAQRQLLLEGKMHGFLRMYWAKKILE---WTASPEEALSIAIYLNDRLSLDGCDPNGYVGC 477

  Fly   412 DWSVCA-GNWMWVSSSAFERLLDSSLVTC 439
            .||:|. .:..|.....|.::...:...|
Zfish   478 MWSICGIHDQGWAERPIFGKIRYMNYAGC 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cryNP_732407.1 PhrB 4..504 CDD:223492 102/484 (21%)
DNA_photolyase 8..175 CDD:279247 39/182 (21%)
FAD_binding_7 310..510 CDD:281440 35/159 (22%)
cpdpXP_005168471.1 phr2 68..519 CDD:129679 102/484 (21%)
DNA_photolyase 91..251 CDD:279247 41/191 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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