DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cry and phr

DIOPT Version :9

Sequence 1:NP_732407.1 Gene:cry / 42305 FlyBaseID:FBgn0025680 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_523653.2 Gene:phr / 35735 FlyBaseID:FBgn0003082 Length:555 Species:Drosophila melanogaster


Alignment Length:518 Identity:110/518 - (21%)
Similarity:162/518 - (31%) Gaps:197/518 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GANVIWFRHGLRLHDNPALLAA--LADKDQ-----GIALIPVFIFDGESAGTKNVGYNRMRFLLD 62
            |..|.|.....|:.||.|||.|  ||.|.:     ...|:|.|:         |......:|::.
  Fly   115 GGVVYWMSRDGRVQDNWALLFAQRLALKLELPLTVVFCLVPKFL---------NATIRHYKFMMG 170

  Fly    63 SLQDIDDQLQAATDGRGRLLVFEGEPAYIFRRLHEQVRLHRICIEQDCEPIWNERDESIRSLCRE 127
            .||:::.|                                                      ||.
  Fly   171 GLQEVEQQ------------------------------------------------------CRA 181

  Fly   128 LNIDF-------VEKVSHTLWDPQLVIETNGG-----IPPLTYQMFLHTVQIIG--LP---PRPT 175
            |:|.|       |||:      ||.|...:.|     ..||  ::....|:.:|  ||   |...
  Fly   182 LDIPFHLLMGSAVEKL------PQFVKSKDIGAVVCDFAPL--RLPRQWVEDVGKALPKSVPLVQ 238

  Fly   176 ADARLEDATFVELDPE--FCRSL------KLFEQL----PTPEHFNVYGDNMGFLAKINWRGGET 228
            .||......:|..|.:  ..|::      ||.|.|    |...|  .:|.....:..::|  ...
  Fly   239 VDAHNVVPLWVASDKQEYAARTIRNKINSKLGEYLSVFPPVVRH--PHGTGCKNVNTVDW--SAA 299

  Fly   229 QALLLLDERLKVEQHAFERGFYLPNQAL-----------------PNIHDSPKSMSAHLRFGCLS 276
            .|.|..|..:...|.| :.|:....|.|                 |.. |:...:|..|.||.:|
  Fly   300 YASLQCDMEVDEVQWA-KPGYKAACQQLYEFCSRRLRHFNDKRNDPTA-DALSGLSPWLHFGHIS 362

  Fly   277 VRRFYWSVHDLFKNVQLRACVRGVQMTGGAHITG-------QLIWREYFYTMSVNNPNYDRMEG- 333
            .:|                |...||...|.|...       .::.||........|.:||.::| 
  Fly   363 AQR----------------CALEVQRFRGQHKASADAFCEEAIVRRELADNFCFYNEHYDSLKGL 411

  Fly   334 ---------------NDICLSIPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNT 383
                           .|.|.|:      |.|.:|    .|...|.:.|..||:.||.:|..||..
  Fly   412 SSWAYQTLDAHRKDKRDPCYSL------EELEKS----LTYDDLWNSAQLQLVREGKMHGFLRMY 466

  Fly   384 VATFLTRGGLWQSW-EHGLQHFL----KYLLDAD---------WSVCAGNWM-WVSSSAFERL 431
            .|..:..   |.:. ||.|::.:    ||.||..         ||:...:.| |...:.|.::
  Fly   467 WAKKILE---WTATPEHALEYAILLNDKYSLDGRDPNGYVGCMWSIGGVHDMGWKERAIFGKV 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cryNP_732407.1 PhrB 4..504 CDD:223492 110/518 (21%)
DNA_photolyase 8..175 CDD:279247 39/190 (21%)
FAD_binding_7 310..510 CDD:281440 36/160 (23%)
phrNP_523653.2 phr2 93..547 CDD:129679 110/518 (21%)
DNA_photolyase 117..278 CDD:279247 48/231 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0415
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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