DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cry and cry-dash

DIOPT Version :9

Sequence 1:NP_732407.1 Gene:cry / 42305 FlyBaseID:FBgn0025680 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_031759840.1 Gene:cry-dash / 100487730 XenbaseID:XB-GENE-5887316 Length:523 Species:Xenopus tropicalis


Alignment Length:560 Identity:142/560 - (25%)
Similarity:226/560 - (40%) Gaps:150/560 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATRGANVI-WFRHGLRLHDNPALLAALADKDQGIALIPVFIFDGESAGTKN------VGYNRMR 58
            ||.|...:| ..|:.||||||..|..|..:.||   ::|::.||....|..:      .|.:|::
 Frog     1 MAARARVIICLLRNDLRLHDNEVLHWAHRNADQ---IVPLYCFDPRHYGGTHYFNFPKTGPHRLK 62

  Fly    59 FLLDSLQDIDDQLQAATDGRG-RLLVFEGEPAYIFRRLHEQ------VRLHRICIEQDCEPIWNE 116
            |||:|:||:.:.|:.    || .||:..|:|..|...|.:|      |.||....:::     .:
 Frog    63 FLLESVQDLRNTLKE----RGSNLLLRRGKPEEIIAGLVKQLGNVSAVTLHEEATKEE-----TD 118

  Fly   117 RDESIRSLCRELNIDFVEKVSHTLWDPQLVIETNGGIP-------PLTYQMFLHTVQIIG----- 169
            .:.::|.:|.:|.:.:     .|.|...|....:  :|       |..|..|....:..|     
 Frog   119 VESAVRRVCTQLGVRY-----QTFWGSTLYHRED--LPFRHISSLPDVYTQFRKAAETQGKVRST 176

  Fly   170 ------LPPRPTADARLEDATFVELDPEFCRSLKLFEQLPTPEHFNVYGDNMGFLAKINWRGGET 228
                  |.|.|:.   ||:.:                 :||.:.|:.........:.....||||
 Frog   177 FQMPDRLKPLPSG---LEEGS-----------------VPTHQDFDQQDPLTDPRSAFPCCGGET 221

  Fly   229 QALLLLDERLKVEQHAFERGFYLPN---------QALPNIHDSPKSMSAHLRFGCLSVRRFYWSV 284
            |||    :||    |.:   |:..|         ..|..|..|.| .:..|..||:|.|..|..:
 Frog   222 QAL----QRL----HHY---FWETNLVASYKDTRNGLIGIDYSTK-FAPWLALGCISPRYIYEQI 274

  Fly   285 HDLFKNVQLRACVRGVQMTGGAH---ITGQLIWREYFYTMSVNNPNYDR-------MEGNDICLS 339
            ....|           :.|....   :..:|:||:||..:::   .|.|       ::..|    
 Frog   275 RKYEK-----------ERTANQSTYWVIFELLWRDYFRFVAL---KYGRRIFFLRGLQDKD---- 321

  Fly   340 IPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHF 404
            :|| |.:..|..:|:.|:||.|.:|..||:|...|::.:..|..||:|||: .|...|..|.:.|
 Frog   322 VPW-KKDPKLFDAWKEGRTGVPFVDANMRELAMTGFMSNRGRQNVASFLTK-DLXIDWRLGAEWF 384

  Fly   405 LKYLLDADWSVCA--GNWMWVSS-----------SAFERLLDSSLVTCPVALAKRLDPDGTYIKQ 456
             :||| .|:.||:  |||::.:.           :..::.||             .|..|.||:.
 Frog   385 -EYLL-VDYDVCSNYGNWLYSAGIGNDPRENRKFNMIKQGLD-------------YDAGGDYIRL 434

  Fly   457 YVPELMNVPKEFVHEPWRMSAEQQEQYECLIGVHYPERII 496
            :||||..:.....|.||.:|..........:|..||..|:
 Frog   435 WVPELQQIKGGDAHTPWALSTASLAHSNVSLGETYPYPIV 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cryNP_732407.1 PhrB 4..504 CDD:223492 140/557 (25%)
DNA_photolyase 8..175 CDD:279247 50/198 (25%)
FAD_binding_7 310..510 CDD:281440 59/207 (29%)
cry-dashXP_031759840.1 crypto_DASH 6..439 CDD:274288 129/518 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D378952at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X403
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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