DRSC/TRiP Functional Genomics Resources

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Protein Alignment myd and Rcn2

DIOPT Version :10

Sequence 1:NP_732406.1 Gene:myd / 42303 FlyBaseID:FBgn0051475 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_058828.2 Gene:Rcn2 / 29218 RGDID:3548 Length:320 Species:Rattus norvegicus


Alignment Length:321 Identity:87/321 - (27%)
Similarity:153/321 - (47%) Gaps:52/321 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 SRNENNHRQPHPQSQKVQNASKSPNQPETVILAASNVNE---------KQILAKAFKRADRSRDG 173
            |:.|..|   :||.:     .::....||::....:|:|         ::.|....|:.|...||
  Rat    26 SKAEELH---YPQGE-----HRADYDRETLLGVQEDVDEYVKLGHEEQQRRLQSIIKKIDSDSDG 82

  Fly   174 ILSIQELGQYINRRIVEHIDEAIMNNAREFRRVDIGPADGLITWDEYH-RFFLREHGMTEADIDE 237
            .|:..||.|:|......:   |:....::|...|.. :||.:|||||: :.:.|     ..|.||
  Rat    83 FLTENELSQWIQMSFKHY---AMQEAKQQFVEYDKN-SDGTVTWDEYNVQMYDR-----VIDFDE 138

  Fly   238 HDEIRHTALNRRAREDM----MRDKARWSEAARTDLFTLTIDEYLSFRHPESSVSNLLE-LVDDL 297
                 :|||:....|..    ::||.|:.:|.:.....|.::|:::|.||| .|..:.| ::.:.
  Rat   139 -----NTALDDTEEESFRQLHLKDKKRFEKANQDSGPGLNLEEFIAFEHPE-EVDYMTEFVIQEA 197

  Fly   298 LRQFDQDGDDQLTLEEF-----SDLNVDDDDDLMRKSLISKTLVERREEFKRIIDKNHDGKADRG 357
            |.:.|::||..::||||     .|...::|.:.:        ||| ::.|....||:.||:.|..
  Rat   198 LEEHDKNGDGFVSLEEFLGDYRRDPTANEDPEWI--------LVE-KDRFVNDYDKDSDGRLDPQ 253

  Fly   358 ELLNYVNPKTPRYALQEAATLFSLCDENKDELLTLKEMTDHAEIFLQSKMIDTANSFHTEF 418
            |||::|.|.....|.:||..|....|.|.|:.|:.:|:.::.::||.|:..|.....|.::
  Rat   254 ELLSWVVPNNQGIAQEEALHLIDEMDLNSDKKLSEEEILENQDLFLTSEATDYGRQLHDDY 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mydNP_732406.1 EFh_CREC 160..403 CDD:330175 73/253 (29%)
EF-hand motif 160..188 CDD:320023 10/27 (37%)
EF-hand motif 198..228 CDD:320023 10/30 (33%)
EF-hand motif 256..285 CDD:320023 9/28 (32%)
EF-hand motif 293..322 CDD:320023 9/33 (27%)
EF-hand motif 338..367 CDD:320023 11/28 (39%)
EF-hand motif 374..403 CDD:320023 8/28 (29%)
Rcn2NP_058828.2 EFh_CREC_RCN2 32..299 CDD:320022 80/298 (27%)
EF-hand motif 32..62 CDD:320022 7/37 (19%)
EF-hand motif 68..97 CDD:320022 10/28 (36%)
EF-hand motif 104..133 CDD:320022 10/34 (29%)
EF-hand motif 156..185 CDD:320022 10/29 (34%)
EF-hand motif 193..222 CDD:320022 8/28 (29%)
EF-hand motif 234..263 CDD:320022 12/29 (41%)
EF-hand motif 270..299 CDD:320022 8/28 (29%)
Prevents secretion from ER. /evidence=ECO:0000255|PROSITE-ProRule:PRU10138 317..320
Blue background indicates that the domain is not in the aligned region.

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