DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31475 and Sdf4

DIOPT Version :9

Sequence 1:NP_001262725.1 Gene:CG31475 / 42303 FlyBaseID:FBgn0051475 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001289396.1 Gene:Sdf4 / 20318 MGIID:108079 Length:361 Species:Mus musculus


Alignment Length:420 Identity:116/420 - (27%)
Similarity:197/420 - (46%) Gaps:75/420 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 WL-----RCSTLCAILFY-MFFIGLILHSTSQKLQQQLKEQGTSSSSSSSSSSSSSSSSSSSSST 71
            ||     |.|:||.:..: ::|:||:|                  ...:::..::.||:...::.
Mouse     3 WLVAMTPRQSSLCGLAAHGLWFLGLVL------------------LMDATARPANHSSTRERAAN 49

  Fly    72 QADTKMAPNVGHNGAQRWPNTLQELEQQQQK--HEQSMRLQPVANNLDSRNENNHRQPHPQSQKV 134
            :.:.::.|....||.:      .|::....|  |::..    :..::|..:|::  :|....:| 
Mouse    50 REENEIMPPDHLNGVK------LEMDGHLNKDFHQEVF----LGKDMDGFDEDS--EPRRSRRK- 101

  Fly   135 QNASKSPNQPETVILAASNVNEKQILAKAFKRADRSRDGILSIQELGQYINRRIVEHIDEAIMNN 199
                                     |...|.:.|.:.|..:|.:|:..:|..:..||..||:..|
Mouse   102 -------------------------LMVIFSKVDVNTDRRISAKEMQHWIMEKTAEHFQEAVKEN 141

  Fly   200 AREFRRVDIGPADGLITWDEYHRFFLREHGMTEADIDE----HDEIRHTALNRRAREDMMRDKAR 260
            ...||.|| ...||.::||||...||...|..|.:|.|    |:|::   ::...:|.:...:.|
Mouse   142 KLHFRAVD-PDGDGHVSWDEYKVKFLASKGHNEREIAEAIKNHEELK---VDEETQEVLGNLRDR 202

  Fly   261 WSEAAR--TDLFTLTIDEYLSFRHPESSVSNLLELVDDLLRQFDQDGDDQLTLEEFSDLNVDDDD 323
            |.:|..  .||. ||.||:|||.|||.|...|..:|.::.|..|||||.||:|.||..|.|...:
Mouse   203 WYQADNPPADLL-LTEDEFLSFLHPEHSRGMLKFMVKEIFRDLDQDGDKQLSLPEFISLPVGTVE 266

  Fly   324 DLMRKSLISKTLVERREEFKRIIDKNHDGKADRGELLNYVNPKTPRYALQEAATLFSLCDENKDE 388
            :...:.:....:.:|::||:.:||.||||.....||.||::|.....||.||..:.::.|||::.
Mouse   267 NQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTMEELENYMDPMNEYNALNEAKQMIAIADENQNH 331

  Fly   389 LLTLKEMTDHAEIFLQSKMIDTANSFHTEF 418
            .|..:|:..::|.|..||::|.|.:.|.||
Mouse   332 HLEPEEILKYSEFFTGSKLMDYARNVHEEF 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31475NP_001262725.1 EF-hand_7 160..224 CDD:290234 22/63 (35%)
EF-hand_7 296..363 CDD:290234 25/66 (38%)
EFh 301..360 CDD:298682 22/58 (38%)
EFh 344..398 CDD:298682 20/53 (38%)
Sdf4NP_001289396.1 EFh 101..160 CDD:298682 20/85 (24%)
EF-hand_7 102..162 CDD:290234 21/60 (35%)
EF-hand_7 199..260 CDD:290234 29/61 (48%)
EFh 236..302 CDD:298682 23/65 (35%)
EF-hand_7 237..306 CDD:290234 26/68 (38%)
EFh 287..340 CDD:298682 20/52 (38%)
Necessary for intracellular retention in Golgi apparatus lumen 308..361 17/52 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837101
Domainoid 1 1.000 43 1.000 Domainoid score I12342
eggNOG 1 0.900 - - E1_KOG4251
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32121
Inparanoid 1 1.050 154 1.000 Inparanoid score I4312
Isobase 1 0.950 - 0 Normalized mean entropy S5941
OMA 1 1.010 - - QHG49184
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007325
OrthoInspector 1 1.000 - - oto94874
orthoMCL 1 0.900 - - OOG6_108924
Panther 1 1.100 - - LDO PTHR10827
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3736
SonicParanoid 1 1.000 - - X5438
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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