DRSC/TRiP Functional Genomics Resources

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Protein Alignment myd and myd

DIOPT Version :10

Sequence 1:NP_732406.1 Gene:myd / 42303 FlyBaseID:FBgn0051475 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_312103.4 Gene:myd / 1273151 VectorBaseID:AGAMI1_000071 Length:335 Species:Anopheles gambiae


Alignment Length:308 Identity:155/308 - (50%)
Similarity:212/308 - (68%) Gaps:16/308 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 SRNENNHRQPH-PQSQKVQNASKSPNQPETVI---LAASNVNEKQILAKAFKRADRSRDGILSIQ 178
            ||:.::.:.|. .|:....::::|||.|..::   |..|.|.|   |.:||.:||.:.|..|::|
Mosquito    37 SRSHSDGKGPKTEQAGSGVSSNESPNGPAPLVYRKLEESVVKE---LTEAFAKADTNGDKHLTVQ 98

  Fly   179 ELGQYINRRIVEHIDEAIMNNAREFRRVDIGPADGLITWDEYHRFFLREHGMTEADIDEHDEIRH 243
            ||.::||.:|.|||||||..|...|..:|..|.|||::||||..::||..|:..   |.|  ::.
Mosquito    99 ELAKFINFKIREHIDEAIRTNPIMFVEIDHKPRDGLVSWDEYQGYWLRGQGIQG---DSH--MKK 158

  Fly   244 TA---LNRRAREDMMRDKARWSEAARTDLFTLTIDEYLSFRHPESSVSNLLELVDDLLRQFDQDG 305
            :|   |:|:.:|.:.||||.|.||||||..:||:||:|||||||||..|||.||||:|||||.||
Mosquito   159 SAFDKLDRKVKESIARDKAHWMEAARTDPLSLTLDEFLSFRHPESSTVNLLNLVDDILRQFDVDG 223

  Fly   306 DDQLTLEEFSDLNVDDDDDLMRKSLISKTLVERREEFKRIIDKNHDGKADRGELLNYVNPKTPRY 370
            ||.||:|||||:...|..: .:|.::|:.:.||||||.::||||.||||||||||:||:|:.|||
Mosquito   224 DDHLTVEEFSDVQTTDLGE-GKKFILSQNVRERREEFTKVIDKNRDGKADRGELLSYVDPRHPRY 287

  Fly   371 ALQEAATLFSLCDENKDELLTLKEMTDHAEIFLQSKMIDTANSFHTEF 418
            |:|||:|||:|.|.|||:.|.:.||...:.||:.|||:.||.|||.||
Mosquito   288 AIQEASTLFTLADANKDKKLLMHEMLAKSAIFISSKMVHTAESFHDEF 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mydNP_732406.1 EFh_CREC 160..403 CDD:330175 132/245 (54%)
EF-hand motif 160..188 CDD:320023 12/27 (44%)
EF-hand motif 198..228 CDD:320023 13/29 (45%)
EF-hand motif 256..285 CDD:320023 21/28 (75%)
EF-hand motif 293..322 CDD:320023 20/28 (71%)
EF-hand motif 338..367 CDD:320023 22/28 (79%)
EF-hand motif 374..403 CDD:320023 14/28 (50%)
mydXP_312103.4 EFh_CREC 59..320 CDD:330175 139/266 (52%)
EF-hand motif 71..108 CDD:320021 15/36 (42%)
EF-hand motif 118..148 CDD:320021 13/29 (45%)
EF-hand motif 174..203 CDD:320021 20/28 (71%)
EF-hand motif 211..240 CDD:320021 20/28 (71%)
EF-hand motif 255..284 CDD:320021 22/28 (79%)
EF-hand motif 291..320 CDD:320021 14/28 (50%)

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