DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5555 and ETP1

DIOPT Version :9

Sequence 1:NP_001262724.1 Gene:CG5555 / 42302 FlyBaseID:FBgn0038686 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_011853.1 Gene:ETP1 / 856376 SGDID:S000001002 Length:585 Species:Saccharomyces cerevisiae


Alignment Length:523 Identity:165/523 - (31%)
Similarity:258/523 - (49%) Gaps:122/523 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 GLIHLYK-KNERKAIKE-------APSNQLCLLAVPATLNCHDLLNFIAP---CHAEIKHIQIVR 185
            |:|.|:| .|....:.|       .....:|:|.||.....||||:|...   .:.::.:.:|:|
Yeast    86 GIIRLFKLSNANNTLNEKEILTIPGDDTMICILFVPTYFTVHDLLHFYIGDDIVNKQVSNFRILR 150

  Fly   186 D---GSPNQFMVLLEFRSNESALEFYKSYNGSTYNSLEPDSLCHAVWVSEV--ERSEHGAPPMGH 245
            :   |....|.||::||:...|..|.:.:||.:::.::|:: ||.:.|.|:  ::.....|....
Yeast   151 NQQKGMGFNFTVLIKFRNALDAKNFKEEFNGKSFSRMDPET-CHVISVKEIVFQKKLFQRPAANE 214

  Fly   246 --------------------TELPTCPVCLERMDESVDGVLTILCNHAFHASCLMKWGDSTCPVC 290
                                .|||||||||||||....|::||.|.|.||..||.||.:|.||||
Yeast   215 DFPYLLTDPFTVKKKKELVKVELPTCPVCLERMDSETTGLVTIPCQHTFHCQCLNKWKNSRCPVC 279

  Fly   291 RH----VQTPGLVE---DSV-CMECEGTDSLWICLICGHVGCGRYQGGHAAAHFRATNHTFAMQL 347
            ||    :....|::   ||. |..|..||:||||||||:||||||...||..|:..|.|.|||.:
Yeast   280 RHSSLRLSRESLLKQAGDSAHCATCGSTDNLWICLICGNVGCGRYNSKHAIKHYEETLHCFAMDI 344

  Fly   348 GTSSVWDYAGDNFVHRLFQNKSDGKLVASQTEKDEREEKI---DSMQ------------------ 391
            .|..||||||||:||||.||:.|||||......|:....|   |.:|                  
Yeast   345 RTQRVWDYAGDNYVHRLVQNEVDGKLVEVGGSGDDDNNDIGNSDELQNVVYGNRSKNGEKSNSNK 409

  Fly   392 ----------------MEFTYLLTSQLDTQRKYYEERMERLEQEWQNHKATANDAKTEVSELQQL 440
                            :|:..:|.|||::||:|||.:::..:|       ||:|:    |.::.|
Yeast   410 KDGELAANFLRHREYHLEYVQVLISQLESQREYYELKLQEKDQ-------TASDS----SNVESL 463

  Fly   441 QQNMQKEKVNLE--------RKLAQHTAKLKDVQKQLNEERELSKALQSNQSSWHGKYKLLEQQY 497
            :::|:..|:..:        |::||        :.:|.|:..:.:.||:|......|.:.||::.
Yeast   464 KKSMEDLKLQFQVTQKEWQKREMAQ--------KSKLEEDMLVIEGLQANLDHLSKKQEQLEREN 520

  Fly   498 NEFKQTHDAEVTELKEQLRDIMFFLDNQQKL--ANTEIAGGTVT-----GIAEKEPDPNTRRRNR 555
            ...:::..    :|:||::|:||:||:|:|.  |:..:..||:.     |.|  :...:.::||:
Yeast   521 KALEESKQ----DLEEQVKDLMFYLDSQEKFKDADESVKEGTILIQQPHGAA--QASKSKKKRNK 579

  Fly   556 RKK 558
            .||
Yeast   580 NKK 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5555NP_001262724.1 RRM_BRAP2 150..234 CDD:241162 26/91 (29%)
zf-RING_2 249..291 CDD:290367 26/41 (63%)
zf-UBP 304..363 CDD:280334 36/58 (62%)
CENP-F_leu_zip 366..517 CDD:287450 43/195 (22%)
DUF4200 396..517 CDD:290574 31/128 (24%)
ETP1NP_011853.1 RRM_ETP1 114..201 CDD:410116 26/87 (30%)
RING-H2_BRAP2 238..281 CDD:319371 27/42 (64%)
zf-UBP 301..363 CDD:396634 39/61 (64%)
Smc 409..>534 CDD:224117 31/147 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345729
Domainoid 1 1.000 94 1.000 Domainoid score I1693
eggNOG 1 0.900 - - E1_KOG0804
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4926
Inparanoid 1 1.050 244 1.000 Inparanoid score I678
Isobase 1 0.950 - 0 Normalized mean entropy S1679
OMA 1 1.010 - - QHG55462
OrthoFinder 1 1.000 - - FOG0005004
OrthoInspector 1 1.000 - - oto99035
orthoMCL 1 0.900 - - OOG6_102472
Panther 1 1.100 - - LDO PTHR24007
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R400
SonicParanoid 1 1.000 - - X3020
TreeFam 1 0.960 - -
1615.740

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