DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG5555 and Hrd1A

DIOPT Version :9

Sequence 1:	NP_001262724.1	Gene:	CG5555 / 42302	FlyBaseID:	FBgn0038686	Length:	558	Species:	Drosophila melanogaster
Sequence 2:	NP_188230.1	Gene:	Hrd1A / 820854	AraportID:	AT3G16090	Length:	492	Species:	Arabidopsis thaliana

Alignment Length:	187	Identity:	42/187 - (22%)
Similarity:	66/187 - (35%)	Gaps:	64/187 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly   119 GYFSGNPI----VEVTKGLIHLYKKNERKAIKEAPSNQLCLLAVPATLNCHDLLNFIAPCHAEIK 179
            |.:...|:    :|:.:.|:||             |..:|...|       ..:|:..|.|
plant   204 GQWEKKPVYTFYLELIRDLLHL-------------SMYICFFFV-------IFMNYGVPLH---- 244

  Fly   180 HIQIVRDGSPNQFMVLLE-FRSNESALEFYKSYNGSTYNSLE--PDSLCHAVWVSEVERSEHGAP 241
               ::|:        |.| ||:.:..:..|..|...|.|..:  ||:....:..|:.
plant   245 ---LLRE--------LYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDA-------- 290

  Fly   242 PMGHTELPTCPVCLERMDESVDGVLTILCNHAFHASCLMKW--GDSTCPVCRHVQTP 296
                    ||.:|.|.|..:    ..::|.|.||..||..|  ...|||.||.:..|
plant   291 --------TCIICREEMTNA----KKLICGHLFHVHCLRSWLERQQTCPTCRALVVP 335

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG5555	NP_001262724.1	RRM_BRAP2	150..234	CDD:241162	18/86 (21%)
		zf-RING_2	249..291	CDD:290367	15/43 (35%)
		zf-UBP	304..363	CDD:280334
		CENP-F_leu_zip	366..517	CDD:287450
		DUF4200	396..517	CDD:290574
Hrd1A	NP_188230.1	HRD1	3..386	CDD:227568	42/187 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910