Protein Alignment CG5555 and brap

DIOPT Version :10

• Sequence 1: NP_001262724.1
• Gene: CG5555 / 42302
• FlyBaseID: FBgn0038686
• Length: 558
• Species: Drosophila melanogaster
• Sequence 2: XP_002937733.1
• Gene: brap / 100488470
• XenbaseID: XB-GENE-491855
• Length: 585
• Species: Xenopus tropicalis
• Alignment Length: 602
• Identity: 238/602 - (39%)
• Similarity: 356/602 - (59%)
• Gaps: 70/602 - (11%)

  Fly     7 NISLCVIKIE----------------TDLDPSADSEGA--VSAEH-----PTNPRVLKERERDRG 48
            ::||.||::|                |::......|..  |:|.:     |.:...:..:.  .|
 Frog     2 SVSLVVIRLELADHSRFPVGFQYCAATEMSDEEVKENTLHVAATYLEGKLPVDKTAILHQH--IG 64

  Fly    49 LRQSRDITIETYTNQRWKRELSEPRQQEMNWVAAVQHVNSPSAGSSREITPRSGDDGQA------ 107
            .|:..|:.|||..        ..|..:    |::.:.::.|.|     :|.::..|.|.
 Frog    65 RREMTDMIIETLG--------PSPDVK----VSSTEKMDEPLA-----VTNKASMDEQGICAMAV 112

  Fly   108 -GASASNFPQEIGYFSGNPIVEVTKGLIHLYKKNERKAIKE--APSNQLCLLAVPATLNCHDLLN 169
             .:.:...|::|.:|||||.||:..|::||||.|:..::||  ..|..||:|.||||:..|||:.
 Frog   113 PDSPSKQLPEQITFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRSAMLCILTVPATMTSHDLMK 177

  Fly   170 FIAPCHAEIKHIQIVRDGSPNQFMVLLEFRSNESALEFYKSYNGSTYNSLEPDSLCHAVWV--SE 232
            |:|..:..|:|::|:||.:|||:|||::|.|...|..||.:.||..:||:|.| :|..|:|  :|
 Frog   178 FVASFNEVIEHMKIIRDSTPNQYMVLIKFSSQADADSFYMANNGRQFNSIEED-VCQLVYVERAE 241

  Fly   233 VERSEHGA--PPMGHTELPTCPVCLERMDESVDGVLTILCNHAFHASCLMKWGDSTCPVCRHVQT 295
            |.:||.||  |.|..||||.|.||||||||||:|:||.||||:||:.||.:|.|:||||||:.||
 Frog   242 VLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWEDTTCPVCRYCQT 306

  Fly   296 PGLVEDSVCMECEGTDSLWICLICGHVGCGRYQGGHAAAHFRATNHTFAMQLGTSSVWDYAGDNF 360
            |..||::.|.||...::|||||||||:|||||...||..||..|.||:||||....||||||||:
 Frog   307 PEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNY 371

  Fly   361 VHRLFQNKSDGKLVASQTEKDE-REEKIDSMQMEFTYLLTSQLDTQRKYYEERMERLE----QEW 420
            ||||..:|:|||:|..:.|.|. ::|||||:|:|::|||||||::||.|:|.::.|||    :|.
 Frog   372 VHRLVASKTDGKIVQYECEGDTCQDEKIDSLQLEYSYLLTSQLESQRIYWENKIVRLEKDTAEEI 436

  Fly   421 QNHKATANDAKTEVSELQQLQQNMQKEKVNLERKLAQHTAKLKDVQKQLNEERELSKALQSNQSS 485
            .|.||...:...:...|:....::.|||..:||:.||..:|:..:..:|.||:|::|.|::||:.
 Frog   437 NNMKAKFKETIDKCDSLEHRLNDLSKEKQAVERRCAQLNSKVAKLSTELKEEQEMNKCLRANQTM 501

  Fly   486 WHGKYKLLEQQYNEFKQTHDAEVTELKEQLRDIMFFLDNQQKL----ANT--EIAGGTVTGIAEK 544
            ...:.:..|....|..:..|.::.|::|||||:||:|:.|||:    |:|  ||..|.:...:..
 Frog   502 LQSRLREEEIMRKETCEQKDVQLLEMQEQLRDVMFYLETQQKINHMPADTRQEIQDGQINIASPS 566

  Fly   545 EPDPN---TRRRNRRKK 558
            .|..:   :.|:.|.|:
 Frog   567 SPAASGKLSSRKGRGKR 583

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5555	NP_001262724.1	RRM_BRAP2	150..234	CDD:410117	39/85 (46%)
		RING-H2_BRAP2	249..292	CDD:438121	30/42 (71%)
		zf-UBP	304..366	CDD:460464	40/61 (66%)
		SMC_prok_B	<367..>519	CDD:274008	58/156 (37%)
brap	XP_002937733.1	RRM_BRAP2	158..241	CDD:410117	38/83 (46%)
		RING-H2_BRAP2	260..303	CDD:438121	30/42 (71%)
		zf-UBP	315..377	CDD:460464	40/61 (66%)
		SMC_prok_B	<395..564	CDD:274008	62/168 (37%)