DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqz and AZF1

DIOPT Version :9

Sequence 1:NP_524403.1 Gene:sqz / 42300 FlyBaseID:FBgn0010768 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_014756.3 Gene:AZF1 / 854280 SGDID:S000005639 Length:914 Species:Saccharomyces cerevisiae


Alignment Length:515 Identity:106/515 - (20%)
Similarity:197/515 - (38%) Gaps:126/515 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 TTAQLVHDYKPFNISEFRQNVAERLDYSL-------KNGLVQHQQQMVMEQQPHPDQQQQQHLHH 88
            ||:....|.|... ...|:::.:..:||.       ||.:::..:.:    ..|.|:...|....
Yeast   409 TTSNSRKDLKEIE-QRLRKHLNDEDNYSSAISRPLDKNDVIEGSEGL----NKHIDESGMQPNII 468

  Fly    89 PQQQQHPPQLKVSYSAPNSPP-------TPHEQQEQKYDPNRSPPRQQMSSASGSGSN--GSSPE 144
            .::::....:.|....|.:.|       |..|.........:.||...:||.|...:|  |::..
Yeast   469 KKRKKDDSTVYVKNEMPRTDPPMSKDNSTSAEGAAMANFSGKEPPIPDISSVSDDATNLIGATKV 533

  Fly   145 EE-------SRRG---------DGD------------------------------QAKPYKCGSC 163
            ::       .::|         |||                              ..|.::|..|
Yeast   534 DQLMLIIQARKKGFTEKVNTTQDGDLLFNQTMDILPPKSELVGGVEKPKGTQNTRAVKKHECPYC 598

  Fly   164 SKSFANSSYLSQHTRIHLGIKPYRCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHAGCPKAFSQL 228
            .:.|:.:::|..|.|.|:|.||:.|:.|.::|||..:|:.|.|.|||:|||.|..  |.|.||:.
Yeast   599 HRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDI--CDKKFSRK 661

  Fly   229 SNLQSHSRCHQTDKPFKC--NSCYKCFSDEMTLLEHIPKHKDSKH---LKTHICNLCGKSYTQET 288
            .||.:|...||..|||.|  .:|.|.|    |.|.::..|::..|   |......|...:.::..
Yeast   662 GNLAAHLVTHQKLKPFVCKLENCNKTF----TQLGNMKAHQNRFHKETLNALTAKLAEMNPSENI 722

  Fly   289 YLQKH--------LQKHAEKAEKQQHR----HTAQVAAHQQHVPASGIGLNLQRQAMN------- 334
            .|::.        :.|::.:..|.:.:    ..:.:::.:.| |||.| ||....|.|       
Yeast   723 PLEERQLLEYFASIYKNSNRGIKGRGKGVGTKKSTISSPENH-PASTI-LNPNTNANNAIANDSE 785

  Fly   335 -------DVNAAYWAKMGADSAAASLAE---AIQQQLPQAGGQPYGNFASLQQQHQQQQQELLH- 388
                   :::::..:..|:.|..:...:   .:|.|..|      .||.:.........|.::: 
Yeast   786 NNGNPEGNIDSSSNSNPGSHSMISPTQKDMGTLQSQFIQ------NNFNNSVNSSNPSNQPIINY 844

  Fly   389 ------HQRL----ADTPGHSHSPHEEAAGEDLVLRQSTPQHHLQQQQQQQQQQQAQQQQ 438
                  |.||    :....:::|.....|...:::..:|.........|....:::||:|
Yeast   845 NYTTLPHSRLGSSSSSNTNNNNSNFSVGAAPGVLMAPTTNNDFSFNLDQSNDNERSQQEQ 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqzNP_524403.1 C2H2 Zn finger 160..180 CDD:275368 6/19 (32%)
zf-H2C2_2 172..197 CDD:290200 10/24 (42%)
zf-C2H2 186..208 CDD:278523 8/21 (38%)
C2H2 Zn finger 188..208 CDD:275368 8/19 (42%)
zf-C2H2_8 191..271 CDD:292531 33/81 (41%)
zf-H2C2_2 200..227 CDD:290200 13/26 (50%)
C2H2 Zn finger 216..238 CDD:275368 8/21 (38%)
C2H2 Zn finger 246..266 CDD:275368 6/21 (29%)
C2H2 Zn finger 277..297 CDD:275368 2/27 (7%)
AZF1NP_014756.3 COG5048 342..768 CDD:227381 82/370 (22%)
C2H2 Zn finger 595..615 CDD:275368 6/19 (32%)
C2H2 Zn finger 623..643 CDD:275368 8/19 (42%)
C2H2 Zn finger 651..671 CDD:275368 8/21 (38%)
C2H2 Zn finger 679..702 CDD:275368 7/26 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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