DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqz and ZKSCAN1

DIOPT Version :10

Sequence 1:NP_524403.1 Gene:sqz / 42300 FlyBaseID:FBgn0010768 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_003430.1 Gene:ZKSCAN1 / 7586 HGNCID:13101 Length:563 Species:Homo sapiens


Alignment Length:290 Identity:88/290 - (30%)
Similarity:135/290 - (46%) Gaps:44/290 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 NISEFRQNVAERLDYSLKNGLVQHQQQMVMEQQPHPDQQQQQHLHHPQQQQHPPQLKVSYSAPNS 107
            |.:|...:.||..:.|...|      :.....|....:::.|.....::||..|:.|......:|
Human   272 NENEESTSKAETSEDSASRG------ETTGRSQKEFGEKRDQEGKTGERQQKNPEEKTRKEKRDS 330

  Fly   108 PPTPHEQQEQKYDPNRSPPRQQ---MSSASGSGSNGSSPEE-----ESRRGD------------- 151
            .|.  ..:::|.......||::   :..:....||.::|||     :|.|.|             
Human   331 GPA--IGKDKKTITGERGPREKGKGLGRSFSLSSNFTTPEEVPTGTKSHRCDECGKCFTRSSSLI 393

  Fly   152 -------GDQAKPYKCGSCSKSFANSSYLSQHTRIHLGIKPYRCEICQRKFTQLSHLQQHIRTHT 209
                   |:  |||:|..|.|:|:.:|.|..|.|||.|.||:.|..|.:.|:..|:|..|.|.|:
Human   394 RHKIIHTGE--KPYECSECGKAFSLNSNLVLHQRIHTGEKPHECNECGKAFSHSSNLILHQRIHS 456

  Fly   210 GDKPYKCRHAGCPKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEMTLLEHIPKHKDSKHLKT 274
            |:|||:|..  |.|||||.|:|..|.|.|..:||::|:.|.|.|:....|:.|...|...|..| 
Human   457 GEKPYECNE--CGKAFSQSSDLTKHQRIHTGEKPYECSECGKAFNRNSYLILHRRIHTREKPYK- 518

  Fly   275 HICNLCGKSYTQETYLQKHLQKHA-EKAEK 303
              |..|||::|:.:.|..|.:.|| |:|.:
Human   519 --CTKCGKAFTRSSTLTLHHRIHARERASE 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqzNP_524403.1 C2H2 Zn finger 160..180 CDD:275368 8/19 (42%)
COG5048 184..>288 CDD:227381 42/103 (41%)
C2H2 Zn finger 188..208 CDD:275368 7/19 (37%)
C2H2 Zn finger 216..238 CDD:275368 11/21 (52%)
C2H2 Zn finger 246..266 CDD:275368 6/19 (32%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
ZKSCAN1NP_003430.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
SCAN 52..162 CDD:128708
KRAB_A-box 227..262 CDD:143639
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..373 22/108 (20%)
C2H2 Zn finger 355..371 CDD:275368 5/15 (33%)
COG5048 <356..537 CDD:227381 67/187 (36%)
C2H2 Zn finger 379..399 CDD:275368 1/19 (5%)
C2H2 Zn finger 407..427 CDD:275368 8/19 (42%)
C2H2 Zn finger 435..455 CDD:275368 7/19 (37%)
C2H2 Zn finger 463..483 CDD:275368 11/21 (52%)
C2H2 Zn finger 491..511 CDD:275368 6/19 (32%)
C2H2 Zn finger 519..539 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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