Protein Alignment sqz and CG4730

DIOPT Version :10

• Sequence 1: NP_524403.1
• Gene: sqz / 42300
• FlyBaseID: FBgn0010768
• Length: 535
• Species: Drosophila melanogaster
• Sequence 2: NP_651413.1
• Gene: CG4730 / 43099
• FlyBaseID: FBgn0039355
• Length: 392
• Species: Drosophila melanogaster
• Alignment Length: 302
• Identity: 67/302 - (22%)
• Similarity: 113/302 - (37%)
• Gaps: 57/302 - (18%)

  Fly    46 EFRQN-------VAERLDYSLKNGLVQHQQQMVMEQQPHPDQQQQQHLHHPQQQQHPPQLKVSYS 103
            :.|||       :.:|....||.....|::..:..||..                   ::.|:..
  Fly    85 DLRQNPKNEPRTLCKRCAVELKWAYDFHKKMAIANQQLR-------------------EIFVATE 130

  Fly   104 APNSPPTPHEQQEQKYDPNRSPPRQQMSSASGSGSNGSSPEEESRRGDGDQAKPYKCGSCSKSFA 168
            |........|.:|.:.|.|.....:::.....:..:.........|..|..    .|..|.|.|.
  Fly   131 ANTEQEDDVEDEENEADMNEEFLMEEIEEKQETPIDSLEDIVPRNRHTGKS----NCKFCHKEFR 191

  Fly   169 NSSYLSQHTRIHLGIKP-YRCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHAG-----CPKAFSQ 227
            |.|.:::|..|||..:| :||..|.|.:.....|:.|:.:       |.|.:|     |.|.|:.
  Fly   192 NHSRMAKHQMIHLANRPNFRCSQCDRVYLTKQALKVHVDS-------KHRQSGVHCDTCGKVFAI 249

  Fly   228 LSNLQSHSRCHQTDKPFKCNSCYKCFSDEMTLLEHIPKHKDSKHLKTH-ICNL--CGKSYTQETY 289
            ...|:.|.|.|..|.|:.|:.|.:.|:..    .|:..|:..||..:. ||..  |.||:|..:.
  Fly   250 AKALEIHKRYHNRDFPYSCDLCDRRFAQR----SHLTVHQQVKHSGSRFICEFPGCQKSFTSSSS 310

  Fly   290 LQKHLQKHAEKAEKQQHRHTAQVAAHQQHVPASGIGLNLQRQ 331
            |:.|...|.....:..|       .||.:...:.:.::|:|:
  Fly   311 LRNHECTHTAMPFECAH-------CHQSYPARNKLRMHLERK 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqz	NP_524403.1	C2H2 Zn finger	160..180	CDD:275368	7/19 (37%)
		COG5048	184..>288	CDD:227381	32/112 (29%)
		C2H2 Zn finger	188..208	CDD:275368	5/19 (26%)
		C2H2 Zn finger	216..238	CDD:275368	8/26 (31%)
		C2H2 Zn finger	246..266	CDD:275368	4/19 (21%)
		C2H2 Zn finger	277..297	CDD:275368	7/21 (33%)
CG4730	NP_651413.1	zf-AD	46..124	CDD:462262	9/57 (16%)
		C2H2 Zn finger	183..203	CDD:275368	7/19 (37%)
		C2H2 Zn finger	212..232	CDD:275368	5/26 (19%)
		C2H2 Zn finger	240..260	CDD:275368	6/19 (32%)
		C2H2 Zn finger	268..289	CDD:275368	5/24 (21%)
		C2H2 Zn finger	296..318	CDD:275368	7/21 (33%)
		C2H2 Zn finger	325..346	CDD:275368	5/28 (18%)