| Sequence 1: | NP_524403.1 | Gene: | sqz / 42300 | FlyBaseID: | FBgn0010768 | Length: | 535 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001163089.2 | Gene: | rgr / 35843 | FlyBaseID: | FBgn0267792 | Length: | 889 | Species: | Drosophila melanogaster |
| Alignment Length: | 278 | Identity: | 71/278 - (25%) |
|---|---|---|---|
| Similarity: | 118/278 - (42%) | Gaps: | 29/278 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 30 LTTAQLVHDYKPF---NISEFRQNVAERLDYSLKNGLVQHQQQMVME-----QQPHPDQQQQQHL 86
Fly 87 HHPQQQQHPPQLKVSYSAPNSPPTP--HEQQEQKYDPNRSPPRQQMSSASGSGSNGSSPEEESRR 149
Fly 150 GDGDQAKPYKCGSCSKSFANSSYLSQHTRIHLGIKPYRCEICQRKFTQLSHLQQHIRTHTGDKPY 214
Fly 215 KCRHAGCPKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEMTLLEHIPKHKDSKHLKTHICNL 279
Fly 280 CGKSYTQETYLQKHLQKH 297 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| sqz | NP_524403.1 | C2H2 Zn finger | 160..180 | CDD:275368 | 7/19 (37%) |
| COG5048 | 184..>288 | CDD:227381 | 35/103 (34%) | ||
| C2H2 Zn finger | 188..208 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 216..238 | CDD:275368 | 7/21 (33%) | ||
| C2H2 Zn finger | 246..266 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 277..297 | CDD:275368 | 8/19 (42%) | ||
| rgr | NP_001163089.2 | MADF | 334..425 | CDD:214738 | |
| MADF | 466..556 | CDD:214738 | |||
| MADF_DNA_bdg | 595..682 | CDD:463144 | 15/96 (16%) | ||
| C2H2 Zn finger | 691..711 | CDD:275368 | 2/23 (9%) | ||
| C2H2 Zn finger | 719..739 | CDD:275368 | 7/19 (37%) | ||
| COG5048 | 742..>824 | CDD:227381 | 29/86 (34%) | ||
| C2H2 Zn finger | 747..767 | CDD:275368 | 6/19 (32%) | ||
| C2H2 Zn finger | 775..795 | CDD:275368 | 7/21 (33%) | ||
| C2H2 Zn finger | 803..818 | CDD:275368 | 4/14 (29%) | ||
| C2H2 Zn finger | 831..851 | CDD:275368 | 8/19 (42%) | ||
| C2H2 Zn finger | 859..877 | CDD:275368 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||