Protein Alignment sqz and esg

DIOPT Version :10

• Sequence 1: NP_524403.1
• Gene: sqz / 42300
• FlyBaseID: FBgn0010768
• Length: 535
• Species: Drosophila melanogaster
• Sequence 2: NP_476600.1
• Gene: esg / 34903
• FlyBaseID: FBgn0287768
• Length: 470
• Species: Drosophila melanogaster
• Alignment Length: 316
• Identity: 82/316 - (25%)
• Similarity: 132/316 - (41%)
• Gaps: 61/316 - (19%)

  Fly     5 PTAPN------GVPSGDYLHRSIDQLRSLGHLTTAQLVHDYKPFNISEFRQNVAERLDYSLKNGL 63
            |::|:      ..|...|||   .:..|:.....::::|  :|.                   |:
  Fly   163 PSSPSDSLGSLSPPPHHYLH---GRASSVSPPMRSEIIH--RPI-------------------GV 203

  Fly    64 VQHQQQMVMEQQPHPDQQQQQHLHHPQQQQHP--------------PQLKVSYSAPNSPPTPHEQ 114
            .||:.....:...:|......|.||......|              |:...|.|.|......|
  Fly   204 RQHRFLPYPQMPGYPSLGGYTHTHHHHAPISPAYSENSYYSMRSMTPESSCSSSLPEDLSLKH-- 266

  Fly   115 QEQKYDPNRSPPRQQMSSASGSGSNGSSPEEESRRGDGDQAKPYKCGSCSKSFANSSYLSQHTRI 179
            :....:.|.|.|.:|.::.:|..|..:.|...::: |.:|...|:|..|.||::..|.|::|.:.
  Fly   267 KNLNLNLNTSQPGEQAAAKTGDMSPETMPNASAKK-DKNQPPRYQCPDCQKSYSTFSGLTKHQQF 330

  Fly   180 HLGI-------KPYRCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHAGCPKAFSQLSNLQSHSRC 237
            |...       |.:.|:.|.:.:..|..|:.||||||  .|.||..  |.||||:...||.|.|.
  Fly   331 HCPAAEGNQVKKSFSCKDCDKTYVSLGALKMHIRTHT--LPCKCNL--CGKAFSRPWLLQGHIRT 391

  Fly   238 HQTDKPFKCNSCYKCFSDEMTLLEHIPKHKDSKHLKTHICNLCGKSYTQETYLQKH 293
            |..:|||.|..|::.|:|...|..|:..|.|   :|.:.|..|.|::::.:.|.||
  Fly   392 HTGEKPFSCQHCHRAFADRSNLRAHLQTHSD---IKKYSCTSCSKTFSRMSLLTKH 444

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sqz	NP_524403.1	C2H2 Zn finger	160..180	CDD:275368	7/19 (37%)
		COG5048	184..>288	CDD:227381	39/103 (38%)
		C2H2 Zn finger	188..208	CDD:275368	7/19 (37%)
		C2H2 Zn finger	216..238	CDD:275368	10/21 (48%)
		C2H2 Zn finger	246..266	CDD:275368	6/19 (32%)
		C2H2 Zn finger	277..297	CDD:275368	6/17 (35%)
esg	NP_476600.1	KREPA	<278..>329	CDD:483960	15/51 (29%)
		zf-C2H2	309..331	CDD:395048	8/21 (38%)
		C2H2 Zn finger	311..331	CDD:275370	7/19 (37%)
		zf-C2H2	344..366	CDD:395048	7/21 (33%)
		C2H2 Zn finger	346..366	CDD:275368	7/19 (37%)
		zf-C2H2	370..392	CDD:395048	11/23 (48%)
		C2H2 Zn finger	372..392	CDD:275368	10/21 (48%)
		zf-H2C2_2	385..408	CDD:463886	10/22 (45%)
		zf-C2H2	398..420	CDD:395048	7/21 (33%)
		C2H2 Zn finger	400..420	CDD:275368	6/19 (32%)
		C2H2 Zn finger	428..444	CDD:275368	4/15 (27%)