DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sqz and Zfp367

DIOPT Version :9

Sequence 1:NP_524403.1 Gene:sqz / 42300 FlyBaseID:FBgn0010768 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001012051.1 Gene:Zfp367 / 306695 RGDID:1307136 Length:340 Species:Rattus norvegicus


Alignment Length:329 Identity:76/329 - (23%)
Similarity:114/329 - (34%) Gaps:120/329 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 SPPRQQMSSASGSGSNGSSPEEESRRGDGDQAK-------PYKCGSCSKSFANSSYLSQHTRIHL 181
            :||    ||||.:..:|...|||:...|....|       |.  ....:...|.   .:|:...:
  Rat   102 APP----SSASVAAVSGGEDEEEASSPDSGHLKDGIRRGRPR--ADTVRDLINE---GEHSSSRI 157

  Fly   182 GIKPYRCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHAGCPKAFSQLSNLQSHSRCHQTDKPFKC 246
                 ||.||.|.|.:...||.|.|||||::||.|.:..|.|||.|...|::|.|.|..:|||.|
  Rat   158 -----RCNICNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVC 217

  Fly   247 --NSCYKCFSDEMTLLEHIPKHKDSKHLKTHICNLCGKSYTQETYLQKHLQKHAEKAEKQQHRHT 309
              |.|...|                                  |:..:|..|| ..|..::...|
  Rat   218 SENGCLSRF----------------------------------THANRHCPKH-PYARLKREEPT 247

  Fly   310 AQVAAHQQHVPASGIGLNLQRQAMNDVNAAYWAKMGADSAAASLAEAIQQQLPQAGGQPYGNFAS 374
            ..::.||          :...:|..:..|.||             |..:|:.|...|:       
  Rat   248 DTLSKHQ----------STDNKAAAEWLAKYW-------------EMREQRTPTLKGK------- 282

  Fly   375 LQQQHQQQQQELLHHQRLADTPGHSHSPHEEAAGEDLVLRQSTPQHHLQQQQQQQQQQQAQQQQQ 439
            |.|:..|:||:                                |..:||..::..::..||::.|
  Rat   283 LVQKADQEQQD--------------------------------PLEYLQSDEEDDEKSGAQRRLQ 315

  Fly   440 AQHQ 443
            .|.:
  Rat   316 EQRE 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqzNP_524403.1 C2H2 Zn finger 160..180 CDD:275368 2/19 (11%)
zf-H2C2_2 172..197 CDD:290200 7/24 (29%)
zf-C2H2 186..208 CDD:278523 10/21 (48%)
C2H2 Zn finger 188..208 CDD:275368 9/19 (47%)
zf-C2H2_8 191..271 CDD:292531 30/81 (37%)
zf-H2C2_2 200..227 CDD:290200 15/26 (58%)
C2H2 Zn finger 216..238 CDD:275368 9/21 (43%)
C2H2 Zn finger 246..266 CDD:275368 4/21 (19%)
C2H2 Zn finger 277..297 CDD:275368 2/19 (11%)
Zfp367NP_001012051.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..140 13/43 (30%)
COG5048 157..>230 CDD:227381 34/111 (31%)
zf-C2H2 158..179 CDD:278523 10/20 (50%)
C2H2 Zn finger 159..179 CDD:275368 9/19 (47%)
zf-H2C2_2 171..198 CDD:290200 15/26 (58%)
C2H2 Zn finger 187..209 CDD:275368 9/21 (43%)
zf-H2C2_2 202..228 CDD:290200 11/59 (19%)
C2H2 Zn finger 217..256 CDD:275368 12/83 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..317 12/75 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

Return to query results.
Submit another query.