DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqz and Zfp384

DIOPT Version :9

Sequence 1:NP_524403.1 Gene:sqz / 42300 FlyBaseID:FBgn0010768 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001359349.1 Gene:Zfp384 / 269800 MGIID:2443203 Length:615 Species:Mus musculus


Alignment Length:321 Identity:128/321 - (39%)
Similarity:157/321 - (48%) Gaps:102/321 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 KPYKCGSCSKSFANSSYLSQHTRIHLGIKPYRCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHAG 220
            ||:||..|||:|||:|||:||.|||.|.|||.|..||:.|.||||||||.|.||||:||||.|.|
Mouse   347 KPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQKAFRQLSHLQQHTRIHTGDRPYKCAHPG 411

  Fly   221 CPKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEMTLLEHIPKHKDSKHLKTHICNLCGKSYT 285
            |.|||:||||||||.|.|..||||||::|::.::|..:|..|:..| ..||.|.:.|.:|.::||
Mouse   412 CEKAFTQLSNLQSHRRQHNKDKPFKCHNCHRAYTDAASLEAHLSTH-TVKHAKVYTCTICSRAYT 475

  Fly   286 QETYLQKHLQKHAEKAEKQQHRHTAQVAAHQQHVPASGIGLNLQRQAMNDVNAAYWAKMGADSAA 350
            .||||.||::||                    :.|      :||:|    |.||        :||
Mouse   476 SETYLMKHMRKH--------------------NPP------DLQQQ----VQAA--------AAA 502

  Fly   351 ASLAEAIQQQLPQAGGQPYGNFASLQQQHQQQQQELLHHQRLADTPGHSHSPHEEAAGEDLVLRQ 415
            |::|:|..|...||..|     |..|.|.|.|.|                               
Mouse   503 AAVAQAQAQAQAQAQAQ-----AQAQAQAQAQAQ------------------------------- 531

  Fly   416 STPQHHLQQQQQQQQQQQAQQQQQAQHQPSPGPGNSAFTPLSATVAPPPHLQQHRGPPGSA 476
                   .|.|.|.|..||.|||| |.||.|               .|||.|.    ||:|
Mouse   532 -------AQAQAQAQASQASQQQQ-QQQPPP---------------QPPHFQS----PGAA 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqzNP_524403.1 C2H2 Zn finger 160..180 CDD:275368 13/19 (68%)
zf-H2C2_2 172..197 CDD:290200 15/24 (63%)
zf-C2H2 186..208 CDD:278523 14/21 (67%)
C2H2 Zn finger 188..208 CDD:275368 13/19 (68%)
zf-C2H2_8 191..271 CDD:292531 47/79 (59%)
zf-H2C2_2 200..227 CDD:290200 20/26 (77%)
C2H2 Zn finger 216..238 CDD:275368 16/21 (76%)
C2H2 Zn finger 246..266 CDD:275368 5/19 (26%)
C2H2 Zn finger 277..297 CDD:275368 10/19 (53%)
Zfp384NP_001359349.1 C2H2 Zn finger 262..282 CDD:275368
COG5048 <285..440 CDD:227381 65/92 (71%)
C2H2 Zn finger 290..310 CDD:275368
C2H2 Zn finger 318..338 CDD:275368
C2H2 Zn finger 351..371 CDD:275368 13/19 (68%)
C2H2 Zn finger 379..399 CDD:275368 13/19 (68%)
C2H2 Zn finger 407..429 CDD:275368 16/21 (76%)
C2H2 Zn finger 437..457 CDD:275368 5/19 (26%)
C2H2 Zn finger 467..487 CDD:275368 10/19 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7661
SonicParanoid 1 1.000 - - X6293
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.940

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