DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqz and znf362b

DIOPT Version :9

Sequence 1:NP_524403.1 Gene:sqz / 42300 FlyBaseID:FBgn0010768 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001083017.1 Gene:znf362b / 100038768 ZFINID:ZDB-GENE-070424-35 Length:438 Species:Danio rerio


Alignment Length:227 Identity:101/227 - (44%)
Similarity:133/227 - (58%) Gaps:27/227 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 PPTPHEQQEQKYDPNRSP------------PRQQMSSASGSGS-----------NGSSPEEESRR 149
            |..|..:::.|.:.|..|            |.|.::.|....:           |.|..:..|: 
Zfish   202 PKAPRGRKKIKAEHNTGPLLVVPYPLLASGPDQAVTIAKEGKTYRCKVCPRTCFNKSEMQIHSK- 265

  Fly   150 GDGDQAKPYKCGSCSKSFANSSYLSQHTRIHLGIKPYRCEICQRKFTQLSHLQQHIRTHTGDKPY 214
             ...:|||:||..|||||||:|||:||.|||||||||.|..|:..|.||||||||.|.||||:||
Zfish   266 -SHTEAKPHKCPHCSKSFANASYLAQHLRIHLGIKPYHCSYCENSFRQLSHLQQHTRIHTGDRPY 329

  Fly   215 KCRHAGCPKAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFSDEMTLLEHIPKHKDSKHLKTHICNL 279
            ||...||.|||:||||||||.|.|..|||:||.:||:.::|..:|..|:..|. .|:.|::.|::
Zfish   330 KCAQPGCEKAFTQLSNLQSHQRQHNKDKPYKCPNCYRAYTDSASLQIHLSAHA-IKNAKSYCCSM 393

  Fly   280 CGKSYTQETYLQKHLQKHAEKAEKQQHRHTAQ 311
            ||::||.||||.||:.||........| |:.|
Zfish   394 CGRAYTSETYLMKHMSKHTVVEHLVSH-HSPQ 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqzNP_524403.1 C2H2 Zn finger 160..180 CDD:275368 14/19 (74%)
zf-H2C2_2 172..197 CDD:290200 16/24 (67%)
zf-C2H2 186..208 CDD:278523 13/21 (62%)
C2H2 Zn finger 188..208 CDD:275368 12/19 (63%)
zf-C2H2_8 191..271 CDD:292531 45/79 (57%)
zf-H2C2_2 200..227 CDD:290200 19/26 (73%)
C2H2 Zn finger 216..238 CDD:275368 15/21 (71%)
C2H2 Zn finger 246..266 CDD:275368 6/19 (32%)
C2H2 Zn finger 277..297 CDD:275368 11/19 (58%)
znf362bNP_001083017.1 C2H2 Zn finger 247..267 CDD:275368 3/21 (14%)
zf-H2C2_2 259..284 CDD:290200 11/26 (42%)
C2H2 Zn finger 275..295 CDD:275368 14/19 (74%)
zf-H2C2_2 287..312 CDD:290200 16/24 (67%)
C2H2 Zn finger 303..323 CDD:275368 12/19 (63%)
zf-H2C2_2 315..342 CDD:290200 19/26 (73%)
C2H2 Zn finger 331..353 CDD:275368 15/21 (71%)
zf-H2C2_2 345..369 CDD:290200 14/23 (61%)
C2H2 Zn finger 361..381 CDD:275368 6/19 (32%)
C2H2 Zn finger 395..411 CDD:275368 9/15 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 43 1.000 Domainoid score I12363
eggNOG 1 0.900 - - E33208_3BF42
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25947
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.900

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