DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42359 and vma21

DIOPT Version :9

Sequence 1:NP_732404.2 Gene:CG42359 / 42299 FlyBaseID:FBgn0259705 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_001343090.1 Gene:vma21 / 9407312 PomBaseID:SPCC1235.16 Length:88 Species:Schizosaccharomyces pombe


Alignment Length:95 Identity:26/95 - (27%)
Similarity:52/95 - (54%) Gaps:12/95 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VEHHTQQEDTS-----AEVFLWLLAYSVLMFTLPFLGFYGVRSWLQESFPHLDLFTVNCWSVLTA 88
            :|..:|..||:     ..|.|..:.:||.:||||.:.::.....|.:.:..|       ::.|:|
pombe     1 MERKSQVSDTNNNSIPTNVLLKFVGFSVALFTLPLITYFWTLKTLFKGYQTL-------YAGLSA 58

  Fly    89 VVVVNLVVAMYVLKAFREKPPPPLEPVQQD 118
            .|:||:::|:|::.||||....|.:.::::
pombe    59 AVMVNIILALYIVAAFREDSGTPKKDIKRE 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42359NP_732404.2 VMA21 41..>84 CDD:286525 10/42 (24%)
vma21NP_001343090.1 VMA21 19..74 CDD:312820 17/61 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0014426
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR31792
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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