DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42359 and VMA21

DIOPT Version :9

Sequence 1:NP_732404.2 Gene:CG42359 / 42299 FlyBaseID:FBgn0259705 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_001350739.1 Gene:VMA21 / 203547 HGNCID:22082 Length:156 Species:Homo sapiens


Alignment Length:97 Identity:24/97 - (24%)
Similarity:47/97 - (48%) Gaps:14/97 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SPAVIDSPVEH-----------HTQQEDTSAEVFLWLLAYSVLMFTLPFLGFYGVRSWLQESFPH 74
            ||.::   :||           |.:.|.:.|.....||.::.||.|:|...::..:|::.|....
Human    52 SPGLL---LEHRPLLAGRTPRSHRRNESSLASTLKTLLFFTALMITVPIGLYFTTKSYIFEGALG 113

  Fly    75 LDLFTVNCWSVLTAVVVVNLVVAMYVLKAFRE 106
            :.......::.:.|||.|::|:|::|..|:.|
Human   114 MSNRDSYFYAAIVAVVAVHVVLALFVYVAWNE 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42359NP_732404.2 VMA21 41..>84 CDD:286525 8/42 (19%)
VMA21NP_001350739.1 VMA21 80..>122 CDD:312820 8/41 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165153194
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR31792
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.