DRSC/TRiP Functional Genomics Resources

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Protein Alignment nos and Nanos2

DIOPT Version :9

Sequence 1:NP_476658.1 Gene:nos / 42297 FlyBaseID:FBgn0002962 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_001102378.1 Gene:Nanos2 / 365213 RGDID:1562436 Length:136 Species:Rattus norvegicus


Alignment Length:53 Identity:29/53 - (54%)
Similarity:37/53 - (69%) Gaps:0/53 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 CVFCENNNEPEAVINSHSVRDNFNRVLCPKLRTYVCPICGASGDSAHTIKYCP 371
            |.||::|.|...|..||.::.....|:||.||.||||:|||:||.|||:||||
  Rat    61 CNFCKHNGESRHVYTSHQLKTPEGVVVCPILRHYVCPLCGATGDQAHTLKYCP 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nosNP_476658.1 zf-nanos 319..371 CDD:283413 27/51 (53%)
Nanos2NP_001102378.1 zf-nanos 61..113 CDD:399039 27/51 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353617
Domainoid 1 1.000 80 1.000 Domainoid score I8388
eggNOG 1 0.900 - - E1_KOG4602
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001526
OrthoInspector 1 1.000 - - otm44873
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12887
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.800

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