DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppcs and COAB

DIOPT Version :9

Sequence 1:NP_650784.3 Gene:Ppcs / 42295 FlyBaseID:FBgn0261285 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001321808.1 Gene:COAB / 837789 AraportID:AT1G12350 Length:317 Species:Arabidopsis thaliana


Alignment Length:311 Identity:118/311 - (37%)
Similarity:173/311 - (55%) Gaps:18/311 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FYNTHLPPADFEDNRSLLKEFCERHNKLQ---NRIVLVTSGGTTVPLEHNTVRFVDNFSAGTRGS 68
            |:.:..|..:.|:..:.|.:|.|.::..|   .|||.|||||||||||...||::||||:|.||:
plant    15 FFESSPPLKNKEEIVANLNQFIELNSSCQGGMRRIVCVTSGGTTVPLEQRCVRYIDNFSSGNRGA 79

  Fly    69 ASAEYFLDHDYAVIFMHRHKSLEPFTRHFTGQQFFDMLDIAD--NSQ---SSTIAIKPDSVDVFA 128
            ||.|.|:...|||||::|..:.:|:.|:.....|.:..:..|  |.|   |.:.|:|...:|..|
plant    80 ASTENFVKAGYAVIFLYRRGTCQPYCRYLPDDPFLECFEFPDAKNIQVHGSHSGAVKMAVMDQQA 144

  Fly   129 PVLAKYKIARETQMILYVNFTSVVDYMWLLRAACECLAAFEERAVLYLAAAVSDFYIPEDMMPTH 193
            .|        ....:|.:.|:::.:|:.:||.....|......::.||||||||||:|...|..|
plant   145 AV--------AEGRLLKLPFSTIYEYLQMLRLIATILKDVGPCSMFYLAAAVSDFYVPWLSMTEH 201

  Fly   194 KMQSGDGAPTISLQLVPKMLAPLASLWVPHAFVVSFKLETDESLLIVKARDSLNKYKHKLVIANV 258
            |::||.|...|.|..|||||:.|.|.|.|.||.:|||||||..:|:.||..:|.|||...|:||.
plant   202 KIESGSGPLDIRLAQVPKMLSILRSNWAPKAFCISFKLETDSKILLEKATKALQKYKVHAVVANE 266

  Fly   259 LQTRKHRVVFVTPTDSYELHLTREQTLQGLEIEEPIVADVVQKHGEFISNA 309
            |.|||..||.|  :.|..:.:.|:.......:|:.::..:|.:|..:|..:
plant   267 LLTRKEEVVVV--SSSGNVVVRRDSNKPESIVEDNLIRLLVDRHSTYIKES 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpcsNP_650784.3 DFP 34..257 CDD:296430 97/230 (42%)
COABNP_001321808.1 PRK05579 <26..267 CDD:235513 103/248 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 99 1.000 Domainoid score I2383
eggNOG 1 0.900 - - E1_COG0452
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6173
Inparanoid 1 1.050 196 1.000 Inparanoid score I1338
OMA 1 1.010 - - QHG53953
OrthoDB 1 1.010 - - D1292767at2759
OrthoFinder 1 1.000 - - FOG0004187
OrthoInspector 1 1.000 - - otm2815
orthoMCL 1 0.900 - - OOG6_102247
Panther 1 1.100 - - LDO PTHR12290
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2934
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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