DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppcs and Ppcdc

DIOPT Version :10

Sequence 1:NP_650784.3 Gene:Ppcs / 42295 FlyBaseID:FBgn0261285 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_789801.1 Gene:Ppcdc / 66812 MGIID:1914062 Length:204 Species:Mus musculus


Alignment Length:208 Identity:45/208 - (21%)
Similarity:66/208 - (31%) Gaps:75/208 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 RAACECLAAFEER------------AVLYLAAAVS-------------------DFYIPEDMMPT 192
            :|.|......|||            |.|.|...||                   .||.|:|:..|
Mouse     4 KAPCPAAVPSEERKFRVLVGVTGSVAALKLPLLVSKLLDVPGLEVTVVTTERAKHFYSPQDVPVT 68

  Fly   193 -------HKMQSGDGAPTISLQLVPKMLAPLASLWVPHAFVVSFKLET--------DESLL--IV 240
                   .:|......|.:.:.|         ..|.....|......|        .::||  ::
Mouse    69 LYSDADEWEMWKRRSDPVLHIDL---------RRWADLMLVAPLDANTLGKVASGICDNLLTCVI 124

  Fly   241 KARDSLNK------------YKHKLVIANVLQTRKHRVVFVTPTDSYELHLTREQTLQGLEIEEP 293
            :|.| |||            ::|.|....|.|.:....|.: |..|.:| :..:|.|..:...|.
Mouse   125 RAWD-LNKPLLFCPAMNTAMWEHPLTAQQVAQLKAFGYVEI-PCVSKKL-VCGDQGLGAMAEVET 186

  Fly   294 IVAD---VVQKHG 303
            |||.   |:.:||
Mouse   187 IVAKVQAVLSQHG 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpcsNP_650784.3 PRK05579 <26..257 CDD:235513 30/157 (19%)
PpcdcNP_789801.1 Flavoprotein 8..195 CDD:450266 40/198 (20%)

Return to query results.
Submit another query.