DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppcs and PPCDC

DIOPT Version :9

Sequence 1:NP_650784.3 Gene:Ppcs / 42295 FlyBaseID:FBgn0261285 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_016877954.1 Gene:PPCDC / 60490 HGNCID:28107 Length:211 Species:Homo sapiens


Alignment Length:183 Identity:38/183 - (20%)
Similarity:58/183 - (31%) Gaps:62/183 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 PKMLAPLASLWVPHAF---------VVSFKLETDESLLIVKARDSLNKYKHKLVIANVLQTR-KH 264
            ||...|.|:..:...|         |.:.||    .||:.|..|...     |.:|.|...| ||
Human     3 PKASCPAAAPLMERKFHVLVGVTGSVAALKL----PLLVSKLLDIPG-----LEVAVVTTERAKH 58

  Fly   265 -------RVVFVTPTDSYELHLTREQTLQGLEIEE--------PIVADVVQKHGEFISN------ 308
                   .|...:..|.:|:..:|...:..:::..        |:.|:.:.|....|.:      
Human    59 FYSPQDIPVTLYSDADEWEIWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCV 123

  Fly   309 --AQQRQXPL--------SMRRRPQTQHQQHH------------HQQLATGDE 339
              |..|..||        :|...|.|..|...            .::|..|||
Human   124 MRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDE 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpcsNP_650784.3 DFP 34..257 CDD:296430 13/55 (24%)
PPCDCXP_016877954.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0452
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.