DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppcs and Ppcs

DIOPT Version :9

Sequence 1:NP_650784.3 Gene:Ppcs / 42295 FlyBaseID:FBgn0261285 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001034099.2 Gene:Ppcs / 298490 RGDID:1311399 Length:311 Species:Rattus norvegicus


Alignment Length:286 Identity:123/286 - (43%)
Similarity:179/286 - (62%) Gaps:2/286 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLKEFCERHNKLQNRIVLVTSGGTTVPLEHNTVRFVDNFSAGTRGSASAEYFLDHDYAVIFMHRH 87
            ::..|..|..:...|:||||||||.||||...|||:||||:|.||:||||.||...|.|:|::|.
  Rat    22 VMARFAARLGEQGRRVVLVTSGGTKVPLEARAVRFLDNFSSGRRGAASAEVFLAAGYGVLFLYRA 86

  Fly    88 KSLEPFTRHFTGQQFFDMLDIADNSQSSTIAIKPD--SVDVFAPVLAKYKIARETQMILYVNFTS 150
            :|..|:...|..|.:...|..:..:||..::::.:  ::..||..|..|:.|......|.|.||:
  Rat    87 RSAFPYAHRFPPQAWLSALRPSGPAQSGKLSLEAEENALPGFAAALQGYQEAAAAGTFLAVEFTT 151

  Fly   151 VVDYMWLLRAACECLAAFEERAVLYLAAAVSDFYIPEDMMPTHKMQSGDGAPTISLQLVPKMLAP 215
            :.||:.||:||...|......|:.||||||||||||...||.||:.|..|...|::::|||||:|
  Rat   152 LADYLHLLQAAALALNPLGSSAMFYLAAAVSDFYIPVSEMPEHKIHSSGGPLQITMKMVPKMLSP 216

  Fly   216 LASLWVPHAFVVSFKLETDESLLIVKARDSLNKYKHKLVIANVLQTRKHRVVFVTPTDSYELHLT 280
            |...|.|.||:||||||||..::|.:||::|..|:|::|:||:|::.|..|:.||.....:|.|:
  Rat   217 LVKDWAPKAFIVSFKLETDPDIIISRARNALEVYQHQVVVANILESIKSFVIIVTKDSETKLLLS 281

  Fly   281 REQTLQGLEIEEPIVADVVQKHGEFI 306
            .::..:|:.|||.||.|:..:|..||
  Rat   282 EDEVARGMVIEEKIVDDLRSRHTAFI 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpcsNP_650784.3 DFP 34..257 CDD:296430 102/224 (46%)
PpcsNP_001034099.2 DFP 37..285 CDD:296430 110/249 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343838
Domainoid 1 1.000 108 1.000 Domainoid score I6342
eggNOG 1 0.900 - - E1_COG0452
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6173
Inparanoid 1 1.050 229 1.000 Inparanoid score I3379
OMA 1 1.010 - - QHG53953
OrthoDB 1 1.010 - - D1292767at2759
OrthoFinder 1 1.000 - - FOG0004187
OrthoInspector 1 1.000 - - oto97955
orthoMCL 1 0.900 - - OOG6_102247
Panther 1 1.100 - - LDO PTHR12290
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2934
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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