DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppcs and F25H9.6

DIOPT Version :10

Sequence 1:NP_650784.3 Gene:Ppcs / 42295 FlyBaseID:FBgn0261285 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_506341.1 Gene:F25H9.6 / 179829 WormBaseID:WBGene00009138 Length:237 Species:Caenorhabditis elegans


Alignment Length:104 Identity:20/104 - (19%)
Similarity:43/104 - (41%) Gaps:34/104 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 QLVPKMLAPLASLWVPHAFVVSFKLETDE------------SLLIVKARDSLNKYKHKLVIANVL 259
            :::|::..||..         :.|:..||            |:.::||.:.:::...|:....:|
 Worm    20 EIMPEIRPPLTR---------THKIVRDESGKHNLLLILTGSIAVMKAPELISELYEKIGRDRIL 75

  Fly   260 QTRKHRVVFVTPTDSYEL-HLTREQTLQGLEIEEPIVAD 297
                  :..||..::.:| |      :|.||.:|.:..|
 Worm    76 ------IKVVTTENAMKLCH------IQKLEFDEIVYED 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpcsNP_650784.3 PRK05579 <26..257 CDD:235513 10/61 (16%)
F25H9.6NP_506341.1 Flavoprotein 42..222 CDD:450266 14/73 (19%)

Return to query results.
Submit another query.