DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12a4 and cyp11c1

DIOPT Version :9

Sequence 1:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_017206857.1 Gene:cyp11c1 / 791124 ZFINID:ZDB-GENE-070828-1 Length:701 Species:Danio rerio


Alignment Length:526 Identity:140/526 - (26%)
Similarity:225/526 - (42%) Gaps:82/526 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 AKPFEQIPRL--NMWALSMKMSMPG---GKYKNMELMEMFEAMRQDYGDIFFMPGIMGNPPFLST 103
            |:.|::||..  |.|...::....|   ..:|:||  |.|..:...|.:      .:|:...::.
Zfish   219 ARLFQEIPDTGSNGWMNLLRFWRDGRFSRMHKHME--ESFRRLGPIYRE------HLGSQSSVNI 275

  Fly   104 HNPQDFEVVFRNEGVWPNRPGNYTLLYHREEYRKDFYQGVMGVIPTQGKPWGDFRTVVNPVLMQP 168
            ..|.|...:||:||:.|.|........|||..|..     .||....|..|...|.::|..:|..
Zfish   276 MLPMDTGELFRSEGLHPRRMTLQPWATHRETRRHS-----KGVFLKNGTEWRADRLLLNREVMVS 335

  Fly   169 KNVRLYYKKMSQVNQEFVQRILELRDPDTLE-----------APDDFIDTINRWTLESVSVVALD 222
            .:|..:...:.:|.|:|.:.:......|..|           :||.|     |:.||:...|...
Zfish   336 SSVHRFLPLLDEVAQDFCRSLRRRVQADGFEKAGQHTLTLDPSPDLF-----RFALEASCHVLYG 395

  Fly   223 KQLGLLKN-SNKESEALKLFHYLDEFFIVSIDLEMKPSPWRYIKTPKLKRLMRALDGIQEVTLAY 286
            :::||..: .:.|||.          ||.:::..:..:|......|:|...:||.......| |:
Zfish   396 ERIGLFSSCPSDESER----------FISAVERMLATTPPLLYLPPRLLLRLRASLWTTHAT-AW 449

  Fly   287 VD---EAIERLDKEAKEGVVRPE-----NEQSVLEKLLKVDR---KVATVMAMDMLMAGVDTTSS 340
            .|   .|.:|:.:..:....||.     :...||.||::..:   ::......:::..|||||:.
Zfish   450 DDIFSHAEQRIQRSYQRLQARPSAAPDCSFPGVLGKLMEAGQLSLELIRANITELMAGGVDTTAV 514

  Fly   341 TFTALLLCLAKNPEKQARLREEVMKVLPNKNSEFTEAS------MKNVPYLRACIKESQRLHPLI 399
            .....|..||:||:.|..:|.:|:       |.:.:||      ::..|.|:..|||:.||:|:.
Zfish   515 PLQFALFELARNPDVQECVRAQVL-------SSWQQASGDPLKALQGAPLLKGTIKETLRLYPVG 572

  Fly   400 VGNARVLARDAVLSGYRVPAGTYVNIVPLNALTRD-EYFPQASEFLPERWLRSPKDSESKCPANE 463
            :...|...||.||..|.|||||.|.:. |..|.|. |.|.:...|.|.||   ..|:::      
Zfish   573 ITVQRYPVRDIVLQNYHVPAGTLVQVC-LYPLGRSAEVFSRPECFDPSRW---SADADA------ 627

  Fly   464 LKSTNPFVFLPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNYPTENAFRSALINLPNIPLK 528
             .|...|..|.||||.|.|||:||.|.|::|....::|.|.:..:...|.:.:..||..|..|.:
Zfish   628 -GSAGGFRSLAFGFGSRQCVGRRIAENEMQLLLMHILRTFKLTVSSTEELSTKYTLILQPECPPR 691

  Fly   529 FKFIDL 534
            ..|..|
Zfish   692 ITFSTL 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 130/488 (27%)
cyp11c1XP_017206857.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.